GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:26:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 93411 from patent US 9029636.
HL002475.1:506-530
TTTCTGAGAGTGGCTGGCCCTCTGAAGGTG506GAGATGGAGCCTCTATTGAAAATGCACGCACTTATTACAGTAATTTGATTGATCA
GLMAW29TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence.
EV270504.1:591-615
TTTCTGAGAGTGGCTGGCCCTCTGAAGGTG591GAGATGGAGCCTCTATTGAAAATGCACGCACTTATTACAGTAATTTGATTGATCA
Glycine max DNA, BAC clone: GMJENa0068F16_R, 3'end, cultivar: ENREI.
LB039730.1:118-142
TTTCTGAGAGTGGCTGGCCCTCTGAAGGTG118GAGATGGAGCCTCTATTGAAAATGCACGCACTTATTACAGTAATTTGATTAATCA
Glycine max isolate WSM04 1,3-beta-glucosidase (Glyma.11G09260) mRNA, complete cds.
ON834796.1:449-473
TTTCTGAGAGTGGCTGGCCCTCTGAAGGTG449GAGATGGAGCCTCTATTGAAAATGCACGCACTTATTACAGTAATTTGATTGATCA
Glycine soja isolate WSM10 1,3-beta-glucosidase (Glyma.11G09260) mRNA, complete cds.
ON834802.1:449-473
TTTCTGAGAGTGGCTGGCCCTCTGAAGGTG449GAGATGGAGCCTCTATTGAAAATGCACGCACTTATTACAGTAATTTGATTGATCA
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:7209469-7209493
TGATCAATCAAATTACTGTAATAAGTGCGT7209469GCATTTTCAATAGAGGCTCCATCTCCACCTTCAGAGGGCCAGCCACTCTCAGAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGATGGAGCCTCTATTGAAAATGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGATGGAGCCTCTATTGAAAATGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.240 | 0.231 | search_plus_done; http://172.18.8.135:50400/match?q=GAGATGGAGCCTCTATTGAAAATGC&k=0&no_gap=0&offset=0&limit=50
0.260 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=GCATTTTCAATAGAGGCTCCATCTC&k=0&no_gap=0&offset=0&limit=45
0.261 | 0.001 | cgi_end;

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