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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-15 19:07:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

RS2BP61JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EX899204.1:37-58
TTTTTTTTCGGAGATGGAATGTTGATAACA37GAGCAACGCAGGAAGAAGAGATTCCAAGTATACTACCAACAAAGCTTTACTG
RR1D739JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
EY893671.1:47-68
TTTCATACCGGAGATGGAATGTTGATAACA47GAGCAACGCAGGAAGAAGAGATTCCAAGTATACTACCAACAAAGCTTTACTG
TSA: Raphanus sativus var. sativus RNA, contig: WG3_2650.
FX662143.1:25-46
TCCGGAGATGGAATGTTGATAACA25GAGCAACGCAGGAAGAAGAGATTCCAAGTATACTACCAACAAAGCTTTACTG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_4929.
FX754068.1:25-46
TCCGGAGATGGAATGTTGATAACA25GAGCAACGCAGGAAGAAGAGATTCCAAGTATACTACCAACAAAGCTTTACTG
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:46379085-46379106
CAGTAAAGCTTTGTTGGTAGTATACTTGGA46379085ATCTCTTCTTCCTGCGTTGCTCTGTTATCAACATTCCATCTCCGGTATTAGA
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:46379085-46379106
CAGTAAAGCTTTGTTGGTAGTATACTTGGA46379085ATCTCTTCTTCCTGCGTTGCTCTGTTATCAACATTCCATCTCCGGTATTAGA

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