GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 20:58:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Meles meles genome assembly, chromosome: 11.
OV277452.1:37018673-37018692
CGGTTATCATGGGAAAAAGACTGTGCCAAT37018673GAGCCACTAGAGAAGGCTTCTTGTACGAAAGGTTCTTCTTCATAAGGAGC
Lotus japonicus genomic DNA, chromosome 6, clone: LjT19M07, TM0114.
AP006076.1:61121-61140
CAACAATCACAAATAGTTGCAACTAAATAA61121GAGCCACTAGAGAAGGCTTCTTCCACCATTGGTAAAGCCGAAGACAAGCA
Muntiacus reevesi genome assembly, chromosome: 1.
OZ005624.1:260012125-260012144
TATCCTTTAAAGACAAAAAATTTCCTAGAC260012125GAAGCCTTCTCTAGTGGCTCAGATTGTAAAGAATCTGCCTGCAATGCAGG
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:64497945-64497964
TGCTTGTCTTCGGCTTTACCAATGGTGGAA64497945GAAGCCTTCTCTAGTGGCTCTTATTTAGTTGCAACTATTTGTGATTGTTG
Cantharis nigra genome assembly, chromosome: 2.
OY294029.1:370959-370978
GAGGTGGTCAGGGCCCGCTGGAATGGTGAA370959GAAGCCTTCTCTAGTGGCTCCCCTGACTTGCTAGGACATGTTCCTGTTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGCCACTAGAGAAGGCTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGCCACTAGAGAAGGCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=GAGCCACTAGAGAAGGCTTC&k=0&no_gap=0&offset=0&limit=50
0.117 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGCCTTCTCTAGTGGCTC&k=0&no_gap=0&offset=0&limit=48
0.120 | 0.002 | cgi_end;

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