GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-17 16:43:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

RS2AD76JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EW728408.1:309-330
AAATACTTGCAATCCAAGCTTGAAAGCTAT309GAGGAGGACAACTCAAGCACAATAAGTTCCTCAGTCATTTGAGACCTCCCAA
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:19870712-19870733
TTGGGAGGTCTCAAATGACTGAGGAACTTA19870712TTGTGCTTGAGTTGTCCTCCTCATAGCTTTCAAGCTTGGATTGCAAGTATTT
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:19870712-19870733
TTGGGAGGTCTCAAATGACTGAGGAACTTA19870712TTGTGCTTGAGTTGTCCTCCTCATAGCTTTCAAGCTTGGATTGCAAGTATTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGGAGGACAACTCAAGCACAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGAGGACAACTCAAGCACAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.263 | 0.255 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGAGGACAACTCAAGCACAA&k=0&no_gap=0&offset=0&limit=50
0.317 | 0.054 | search_minus_done; http://172.18.8.135:50400/match?q=TTGTGCTTGAGTTGTCCTCCTC&k=0&no_gap=0&offset=0&limit=49
0.319 | 0.001 | cgi_end;

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