GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-16 03:11:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC20f18, unspecified EST.
FY461084.1:230-249
ATGGATTTGTACAGGAACTTGATGAGATGC230GAGGCATTGCACCTCAAAATACCCTTCCGTCACGCTCAGGAGAGCTCCAT
Trifolium repens mRNA, clone: WCC38o11_079, unspecified EST.
FY467701.1:271-290
ATGGATTTGTACAAGAACTTGATGAGATGC271GAGGCATTGCACCTCAAAATACCCTTCCGTCACGCTCGGGTGAGCTTCAT
Trifolium repens isolate ACLI19 chromosome 05_0cc.
CP125844.1:53901357-53901376
ATGGATTTGTACAAGAACTTGATGAGATGC53901357GAGGCATTGCACCTCAAAATACCCTTCCGTCACGCTCGGGTGAGCTTCAT
Trifolium repens isolate ACLI19 chromosome 05_Pall.
CP125845.1:54492375-54492394
ATGGATTTGTACAGGAACTTGATGAGATGC54492375GAGGCATTGCACCTCAAAATACCCTTCCGTCACGCTCAGGAGAGCTCCAT
Lathyrus sativus genome assembly, chromosome: 2.
OZ012736.1:489297628-489297647
ATGGATTCGTACAAGAACTTGACGAGATGC489297628GAGGCATTGCACCTCAAAATACTCTTCCGTCACGCTCGGGCGAGTTTCAT
Warburgia ugandensis isolate CL-2023a chromosome 8.
CP141133.1:47538682-47538701
GGGTCCCTCTACTCGTAGTACCATTTATCT47538682ATTTTGAGGTGCAATGCCTCATAGAAGTATTGAACCTATTCTCATTTCTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGGCATTGCACCTCAAAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGCATTGCACCTCAAAAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.263 | 0.254 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGCATTGCACCTCAAAAT&k=0&no_gap=0&offset=0&limit=50
0.281 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=ATTTTGAGGTGCAATGCCTC&k=0&no_gap=0&offset=0&limit=45
0.281 | 0.001 | cgi_end;

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