GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:31:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Peromyscus eremicus genome assembly, chromosome: 15.
OX460481.1:47817130-47817147
GTTAGATCCAATGACCTTCTGAGGTGGAAG47817130GAGGGAATTGATCCTGCAAATTGTCCTTTGACCTCCACTCTTGCACTG
Danio rerio strain T5D chromosome 4.
CP068738.1:2018997-2019014
GTTGGTGAAACGAGTGAAGTTCATCTATAA2018997GAGGGAATTGATCCTGCAACTCTCAGATCAAGGGCGAATGTGCAGCAC
Danio rerio strain Tubingen chromosome 4.
CP137041.2:2204556-2204573
TTGGTGAAACGAGTAGAAGTTCATCTATAA2204556GAGGGAATTGATCCTGCAACTCTCAGATCAAGGGCGAATGTGCAGCAC
Zebrafish DNA sequence from clone CH73-223F1 in linkage group 4.
CU571163.10:77588-77605
TTGGTGAAACGAGTAGAAGTTCATCTATAA77588GAGGGAATTGATCCTGCAACTCTCAGATCAAGGGCGAATGTGCAGCAC
Danio rerio genome assembly, chromosome: 4.
LR812041.1:2215181-2215198
GTTGGTGAAACTAGTGAAGTTCATCTATAA2215181GAGGGAATTGATCCTGCAACTCTCAGATCAAGGGCGAATGTGCAGCCC
Danio rerio strain Nadia (NA) genome assembly, chromosome: 4.
LR812572.1:1968078-1968095
GTTGGTGAAACTAGTGAAGTTCATCTATAA1968078GAGGGAATTGATCCTGCAACTCTCAGATCAAGGGCGAATGTGCAGCCT
Danio rerio genome assembly, chromosome: 4.
LR812597.1:1909139-1909156
GTTGGTGAAACTAGTGAAGTTCATCTATAA1909139GAGGGAATTGATCCTGCAACTCTCAGATCAAGGGCGAATGTGCAGCCC
Zeus faber genome assembly, chromosome: 5.
OY482849.1:14908829-14908846
GCCACTGCTTAAAAGTACCCTTGACAGCGT14908829GAGGGAATTGATCCTGCAGAGCACAGTGCCCATGCTGGGACAGAAGGA
Populus euphratica EST, clone P0000400038E11F1.
AJ778038.1:661-678
AATGGCGTTGCGCTCTCCTCCTCTAGGAGC661GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTACCTCTCAAAC
T010G11 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence.
BU830617.1:131-148
AATGGCGTTGCGCTCTTGTCCTCAAGGAGC131GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
GQ0092.B3_A11 GQ009 Populus trichocarpa x Populus deltoides cDNA clone GQ0092_A11 5', mRNA sequence.
CN517862.1:196-213
AAGAATGGTGCGCTCTCCTCCTCAAGGAGC196GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Y246F02 Hevea brasiliensis YLX600 library Hevea brasiliensis cDNA clone Y246F02 5', mRNA sequence.
JG000462.1:306-323
AATGGTGCTGCAGTTCCCTCCTCAAGGGGT306GAGGGAATTGATCCTGCAGCTCAGGCAGCAGCCGAATACCTCTCAAAC
TSA: Hevea brasiliensis Unigene10794_HB.Hebrbark mRNA sequence.
JR354974.1:147-164
AATGGTGCTGCAGTTCCCTCCTCAAGGGGT147GAGGGAATTGATCCTGCAGCTCAGGCAGCAGCCGAATACCTCTCAAAC
TSA: Hevea brasiliensis contig00177, mRNA sequence.
JT940019.1:734-751
AATGGTGCTGCAGTTCCCTCCTCAAGGGGT734GAGGGAATTGATCCTGCAGCTCAGGCAGCAGCCGAATACCTCTCAAAC
TSA: Betula platyphylla Unigene5983_All.Beplwood mRNA sequence.
KA245904.1:2109-2126
AATGGTGTTACACTTCCCACTATCAGGGGT2109GAGGGAATTGATCCTGCAGCTCAAGCGGCAGCGGAATTCCTCTCGAAT
TSA: Betula platyphylla Unigene5984_All.Beplwood mRNA sequence.
KA245905.1:2226-2243
AATGGTGTTACACTTCCCACTATCAGGGGT2226GAGGGAATTGATCCTGCAGCTCAAGCGGCAGCGGAATTCCTCTCGAAT
ORNL153 Poplar BAC Library Populus trichocarpa genomic similar to Abscisic acid insensitivity gene (ABI1), genomic survey sequence.
BH860820.1:592-609
AATGGCGTTGCGCTCTCCTCCTCAAGGAGC592GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 13.1.
AM690392.1:2522-2539
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2522GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 13.2.
AM690393.1:2525-2542
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2525GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 17.2.
AM690394.1:2521-2538
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2521GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 22.1.
AM690395.1:2519-2536
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2519GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 22.2.
AM690396.1:2525-2542
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2525GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 24.1.
AM690397.1:2521-2538
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2521GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 24.2.
AM690398.1:2521-2538
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2521GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 58.1.
AM690399.1:2521-2538
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2521GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 58.2.
AM690400.1:2521-2538
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2521GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 61.2.
AM690401.1:2522-2539
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2522GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 65.1.
AM690402.1:2524-2541
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2524GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 65.2.
AM690403.1:2524-2541
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2524GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 67.2.
AM690404.1:2523-2540
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2523GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 70.2.
AM690405.1:2520-2537
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2520GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 87.2.
AM690406.1:2524-2541
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2524GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 92.1.
AM690407.1:2524-2541
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2524GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 92.2.
AM690408.1:2518-2535
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2518GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 94.1.
AM690409.1:2520-2537
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2520GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 94.2.
AM690410.1:2522-2539
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2522GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 98.2.
AM690411.1:2524-2541
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2524GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 102.1.
AM690412.1:2524-2541
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2524GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 102.2.
AM690413.1:2522-2539
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2522GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 104.1.
AM690414.1:2522-2539
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2522GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 104.2.
AM690415.1:2522-2539
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2522GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 108.1.
AM690416.1:2522-2539
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2522GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 109.1.
AM690417.1:2524-2541
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2524GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 109.2.
AM690418.1:2522-2539
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2522GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 111.2.
AM690419.1:2524-2541
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2524GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 112.2.
AM690420.1:2524-2541
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2524GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 115.1.
AM690421.1:2522-2539
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2522GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 115.2.
AM690422.1:2522-2539
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2522GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 10.1.
AM690423.1:2357-2374
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2357GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 10.2.
AM690424.1:2355-2372
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2355GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 17.1.
AM690425.1:2355-2372
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2355GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 61.1.
AM690426.1:2356-2373
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2356GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 67.1.
AM690427.1:2355-2372
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2355GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 70.1.
AM690428.1:2356-2373
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2356GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 87.1.
AM690429.1:2354-2371
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2354GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 98.1.
AM690430.1:2356-2373
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2356GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 107.1.
AM690431.1:2354-2371
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2354GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 107.2.
AM690432.1:2354-2371
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2354GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 108.2.
AM690433.1:2356-2373
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2356GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 111.1.
AM690434.1:2354-2371
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2354GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula abi1B gene for abscisic insensitive 1B, isolate 112.1.
AM690435.1:2356-2373
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC2356GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus balsamifera isolate CAR01 abscisic acid insensitivity 1B (ABI1B) gene, complete cds.
JN047546.1:2419-2436
AATGGCGTTGCGCTCTCCTCCTCAAGGAGC2419GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus balsamifera isolate COT03 abscisic acid insensitivity 1B (ABI1B) gene, complete cds.
JN047547.1:2419-2436
AATGGCGTTGCGCTCTCCTCCTCAAGGAGC2419GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus balsamifera isolate DEN08 abscisic acid insensitivity 1B (ABI1B) gene, complete cds.
JN047548.1:2419-2436
AATGGCGTTGCGCTCTCCTCCTCAAGGAGC2419GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus balsamifera isolate FBK13 abscisic acid insensitivity 1B (ABI1B) gene, complete cds.
JN047549.1:2419-2436
AATGGCGTTGCGCTCTCCTCCTCAAGGAGC2419GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus balsamifera isolate FTM05 abscisic acid insensitivity 1B (ABI1B) gene, complete cds.
JN047550.1:2419-2436
AATGGCGTTGCGCTCTCCTCCTCAAGGAGC2419GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus balsamifera isolate GAL12 abscisic acid insensitivity 1B (ABI1B) gene, complete cds.
JN047551.1:2419-2436
AATGGCGTTGCGCTCTCCTCCTCAAGGAGC2419GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Populus tremula protein phosphatase 2C (HAB3b) mRNA, partial cds.
MF802331.1:722-739
AATGGCGTTGCGCTCTCGTCCTCAAGGAGC722GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Buxus sempervirens genome assembly, chromosome: 14.
OX387195.1:28338856-28338873
CACATTCTCATCTCTAGTTTTTTAATTCTA28338856GAGGGAATTGATCCTGCATTCTAAATGTTAGGGCTTTATTCTGATATT
Oldenlandia corymbosa var. corymbosa genome assembly, chromosome: 2.
OX459119.1:6377876-6377893
AATGGTGTCATACCACCCTCGGGAAGAGGT6377876GAGGGAATTGATCCTGCAGCTCAGGCAGCAGCAGAGTGCCTTTCAAAC
Populus nigra genome assembly, chromosome: 3.
OX637674.1:4405401-4405418
AATGGCGTTGCGCTCTCCTCCTCAAGGAGC4405401GAGGGAATTGATCCTGCAGCTCAAGCAGCAGCTGAGTTCCTCTCAAAC
Hibiscus tridactylites genome assembly, chromosome: 11.
OY288275.1:59964623-59964640
GGTGATCAATTGACTGGTGAAAAGGGTGGG59964623GAGGGAATTGATCCTGCAGCTCAATCTGCAGCAGAGTACCTCTCAAGG
Buathra laborator genome assembly, chromosome: 3.
OW203894.1:17136911-17136928
CTCCGACGACGAGATGAACAGACGCGACGA17136911GAGGGAATTGATCCTGCAGTCGCTTCGCCCCTTCCTTTTTCTTCCTCT
Lampropteryx suffumata genome assembly, chromosome: 16.
OX402560.1:15275693-15275710
CATGCAGATCAAACGATCATTTTTCCCGCT15275693GAGGGAATTGATCCTGCAACATTCTGCGTGTCAGACGGACCTTAGCCC
Subacronicta megacephala genome assembly, chromosome: 24.
OY292537.1:3949414-3949431
GGAACAACTAGGCAGTACAAATATTTCCAC3949414GAGGGAATTGATCCTGCAACTGGTCAAATGCGTAGGCACTGTACATTT
Xestia rhomboidea genome assembly, chromosome: 20.
OY970776.1:11186123-11186140
CTGTAGGCCATACAAATATTTTTATTCCGT11186123GAGGGAATTGATCCTGCAACACGCAGCGCAGCATCCAATCACTCAGCC
Ischnus inquisitorius genome assembly, chromosome: 3.
OZ001245.1:6960069-6960086
CTCCGACGACGAGATGAACAGACGCGACGA6960069GAGGGAATTGATCCTGCAGTCCCCTCTCCCCGTCCCTCTTTTCTTCGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGGGAATTGATCCTGCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGGAATTGATCCTGCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.393 | 0.384 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGGAATTGATCCTGCA&k=0&no_gap=0&offset=0&limit=50
0.459 | 0.066 | search_minus_done; http://172.18.8.135:50400/match?q=TGCAGGATCAATTCCCTC&k=0&no_gap=0&offset=0&limit=0
0.459 | 0.000 | cgi_end;

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