GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 11:19:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 2, clone: LjT32P24, TM0120.
AP006081.1:122739-122758
AGAGAGAGAGAGAGAGAGAGATTGCATAAA122739GATAATTGTGGCGTGAATTTTTAATAAAAAGAAAAATATGATGGTAAGAG
Gonocerus acuteangulatus genome assembly, chromosome: 4.
OX328126.1:74426422-74426441
AGGGTGTATTTGTGATTTAAAAGAAGATAT74426422GATAATTGTGGCGTGAATTTATATTGCAACAAAAAAAAAAAAAATCTTTT
Maratus speciosus genome assembly, chromosome: 12.
OZ010799.1:272657559-272657578
GACAGTTGTTGTAACAATGTTAAAATTTTA272657559GATAATTGTGGCGTGAATTTATTAGCAGTTCATTTGAATTTGTTTCGTAC
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:76926419-76926438
CTCTTACCATCATATTTTTCTTTTTATTAA76926419AAATTCACGCCACAATTATCTTTATGCAATCTCTCTCTCTCTCTCTCTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GATAATTGTGGCGTGAATTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GATAATTGTGGCGTGAATTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.093 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=GATAATTGTGGCGTGAATTT&k=0&no_gap=0&offset=0&limit=50
0.109 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=AAATTCACGCCACAATTATC&k=0&no_gap=0&offset=0&limit=47
0.110 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).