GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 16:48:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 4, clone: LjT39E03, TM0266.
AP006392.1:38400-38419
CAGAAAAGAAAAGAAAAAACTTGACAAATT38400GATAGCGTTCGTTAATCAGGAAAATAGAGAGAGAGAGAGAGAGAGAGAGA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:79551231-79551250
CAGAAAAGAAAAGAAAAAACTTGACAAATT79551231GATAGCGTTCGTTAATCAGGAAAATAGAGAGAGAGAGAGAGAGTTAAAGG
Lotus japonicus genomic DNA, chromosome 4, clone: LjB09H01, BM1084.
AP007795.2:13514-13533
TCTCTCTCTCTCTCTCTCTCTCTCTATTTT13514CCTGATTAACGAACGCTATCAATTTGTCAAGTTTTTTCTTTTCTTTTCTG
Lotus japonicus GAGA-binding transcriptional activator (BBR/BPC3) gene, complete cds.
FJ982320.1:242-261
TCTCTCTCTCTCTCTCTCTCTCTCTATTTT242CCTGATTAACGAACGCTATCAATTTGTCAAGTTTTTTCTTTTCTTTTCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GATAGCGTTCGTTAATCAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GATAGCGTTCGTTAATCAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=GATAGCGTTCGTTAATCAGG&k=0&no_gap=0&offset=0&limit=50
0.112 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=CCTGATTAACGAACGCTATC&k=0&no_gap=0&offset=0&limit=48
0.113 | 0.001 | cgi_end;

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