GGGenome | Results

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2025-04-14 08:53:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Pinctada fucata DNA, chromosome 10, nearly complete sequence, Principal Pseudohaplotype.
AP027111.1:39451048-39451067

ATGACTGTTTTGATTCTATGCAGTCATTTT39451048GATGAAGAAAGGTCCGGTGAAATCATTCCAATACCGCCTTGTCGGTTATC

Pinctada fucata DNA, chromosome 10, nearly complete sequence, Alternate Pseudohaplotype.
AP027125.1:40515399-40515418

ATGACTGTTTTGATTCTATGCAGTCATTTT40515399GATGAAGAAAGGTCCGGTGAAATCATTCCAATTCCGTCTTGTTGGATATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.181 | 0.172 | search_plus_done; http://172.18.8.135:50400/match?q=GATGAAGAAAGGTCCGGTGA&k=0&no_gap=0&offset=0&limit=50
0.218 | 0.037 | search_minus_done; http://172.18.8.135:50400/match?q=TCACCGGACCTTTCTTCATC&k=0&no_gap=0&offset=0&limit=48
0.218 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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