GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 20:40:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CHAY11926.b1_K05.ab1 CHA(XYZ) common wild sunflower Helianthus annuus cDNA clone CHAY11926, mRNA sequence.
DY916023.1:546-564
TTTGTTCCGGATGAGGAGATTGGTGGGCAT546GATGCGGCTGAGAAGTTTGTAGATTCTGTGATTTTTGATGAAATGAATG
Vicia faba genome assembly, chromosome: 1L.
OX451736.1:641636006-641636024
ACTTGTCGGAACTCGACATATTTGATGTTA641636006GATGCGGCTGAGAAGTTTGAAACAGCTTTTGATAAGCTAGAAGATGAGG
Pyrus communis genome assembly, chromosome: 17.
OY757084.1:6939675-6939693
TGTGAAGGCACCTGGCATTTGAATTTGTTT6939675GATGCGGCTGAGAAGTTTGTGGTTCTTCGCTTACTGTTTCTTCGATACT
Lathyrus aphaca genome assembly, chromosome: 4.
OZ014522.1:564546111-564546129
ACTAGATGGAACTCGACATATTTGATGTTA564546111GATGCGGCTGAGAAGTTTGAAATTGCTTTTGATAAGCTAGAAGATGAGG
Icerya purchasi genome assembly, chromosome: 1.
OX731680.1:338618565-338618583
CAGTCAAGTAGGAGGTGACGAATAGAAATC338618565GATGCGGCTGAGAAGTTTGGGCAAACTGGGCAAGGGGTGCGAGTAAATA
KR 1020160060384-A/5: A method for identifying pear varieties using microsatellites markers.
LG149951.1:1-19
1CAAACTTCTCAGCCGCATC
Imperialibacter roseus strain P4T chromosome, complete genome.
CP136051.1:199635-199653
GAGTAAAAGACGGCCAGCCCGTGCCCGACT199635CAAACTTCTCAGCCGCATCGAACAGCAACGTGCCGCAGCAAACGCAGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GATGCGGCTGAGAAGTTTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GATGCGGCTGAGAAGTTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.150 | 0.142 | search_plus_done; http://172.18.8.135:50400/match?q=GATGCGGCTGAGAAGTTTG&k=0&no_gap=0&offset=0&limit=50
0.209 | 0.058 | search_minus_done; http://172.18.8.135:50400/match?q=CAAACTTCTCAGCCGCATC&k=0&no_gap=0&offset=0&limit=45
0.210 | 0.001 | cgi_end;

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