GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:08:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 6136 from patent US 10006042.
MI850863.1:198-217
TCTTCATCTCCGCCTCCGCCGCCACCCCCA198AGTACGACCTCAACTCCATCCGCTTCGACCCCATCAAGGAGTCGATCGTC
Sequence 6136 from patent US 10337023.
MO174030.1:198-217
TCTTCATCTCCGCCTCCGCCGCCACCCCCA198AGTACGACCTCAACTCCATCCGCTTCGACCCCATCAAGGAGTCGATCGTC
Sequence 6136 from patent US 10774340.
MV707777.1:198-217
TCTTCATCTCCGCCTCCGCCGCCACCCCCA198AGTACGACCTCAACTCCATCCGCTTCGACCCCATCAAGGAGTCGATCGTC
Sequence 6136 from patent US 11499161.
OO875558.1:198-217
TCTTCATCTCCGCCTCCGCCGCCACCCCCA198AGTACGACCTCAACTCCATCCGCTTCGACCCCATCAAGGAGTCGATCGTC
EG-A01_003_B05 Oil palm normal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN599381.1:203-222
TCTTCATCTCCGCCTCCGCCGCCACCCCCA203AGTACGACCTCAACTCCATCCGCTTCGACCCCATCAAGGAGTCGATCGTC
OPVM00930 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone OPN0XX_B32-9.seq, mRNA sequence.
EL687311.1:8-27
ACCCCCA8AGTACGACCTCAACTCCATCCGCTTCGACCCCATCAAGGAGTCGATCGTC
OPSC00611 Elaeis guineensis Suspension cell cultures Elaeis guineensis cDNA clone 178-D8-T3.seq, mRNA sequence.
EL688850.1:11-30
TCCACCCCCA11AGTACGACCTCAACTCCATCCGCTTCGACCCCATCAAGGAGTCGATCGTC
EoEST1354 Oil palm mesocarp-tissue cDNA Entry Library Elaeis oleifera cDNA clone Mo17-1391 5' similar to putative thiamine biosynthesis protein, mRNA sequence.
EL930518.1:211-230
TCTTCATCTCCGCCTCCGCCGCCACCCCCA211AGTACGACCTCAACTCCATCCGCTTCGACCCCATCAAGGAGTCGATCGTC
EoEST2250 Oil palm mesocarp-tissue cDNA Entry Library Elaeis oleifera cDNA clone Mo17-2402 5' similar to putative thiamine biosynthesis protein, mRNA sequence.
ES323978.1:3-22
CA3AGTACGACCTCAACTCCATCCGCTTCGACCCCATCAAGGAGTCGATCGTC
Elaeis guineensis EST, clone (6lib)_isotig18977.
LM622212.1:193-212
TCTTCATCTCCGCCTCCGCCGCCACCCCCA193AGTACGACCTCAACTCCATCCGCTTCGACCCCATCAAGGAGTCGATCGTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GATGGAGTTGAGGTCGTACT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GATGGAGTTGAGGTCGTACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=GATGGAGTTGAGGTCGTACT&k=0&no_gap=0&offset=0&limit=50
0.789 | 0.695 | search_minus_done; http://172.18.8.135:50400/match?q=AGTACGACCTCAACTCCATC&k=0&no_gap=0&offset=0&limit=50
0.796 | 0.007 | cgi_end;

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