GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Apodemus sylvaticus genome assembly, chromosome: 19.
OX359316.1:59912810-59912827

AACCCATTCATCTATACTTTGAGGAACAAG59912810GATGTGAAGGCTGCCCTGAGGAGGGCACTAACAAAGGAGTTTTGGGTC

Peromyscus eremicus genome assembly, chromosome: 16_21.
OX460410.1:384524-384541

AACCCATTCATCTATACTTTGAGAAACAAG384524GATGTGAAGGCTGCCCTGAGGAGGGCACTGACAAAAGAGTTTTGGGTC

Peromyscus eremicus genome assembly, chromosome: 16_21.
OX460482.1:416587-416604

AACCCATTCATCTATACTTTGAGAAACAAG416587GATGTGAAGGCTGCCCTGAGGAGGGCACTGACGAAAGAGTTTTGGGTC

Capricornis sumatraensis isolate serow.1 chromosome 15.
CP135641.1:83867686-83867703

CAGTTGCTCTTTTATTGCGGCATGACCGAT83867686GATGTGAAGGCTGCCCTGAGCAGGTCTAACAGAAAAGGCTCCTTGGAG

Lutra lutra genome assembly, chromosome: 2.
LR738404.1:293607-293624

AATCCATTTATCTATACACTGAGGAACAAG293607GATGTGAAGGCTGCCCTGAGAAGAGCACTGACCAAGGAGTTTTGGGTC

Cervus elaphus genome assembly, chromosome: 11.
OU343088.1:55194618-55194635

AACCCCTCCCTCCTCCTCACCCTGACCTCA55194618GATGTGAAGGCTGCCCTGGGAAGGGTCCCCTGGGGGACAGGGTGTAGG

Meles meles genome assembly, chromosome: 20.
OV277461.1:33737560-33737577

CATGTCAGGATGTTGTACGTTAAGGAAGCA33737560GATGTGAAGGCTGCCCTGAAATGACGATGGGGAGGCATCATGTAGTTT

Rangifer tarandus platyrhyncus genome assembly, chromosome: 21.
OX459957.2:54227865-54227882

GACCGGAAGTGACTGGCCGGACAGCCGCAG54227865GATGTGAAGGCTGCCCTGCAGGTGGCGCTCAAGGCGCCCACGCAGGTG

Eptesicus nilssonii genome assembly, chromosome: 5.
OX621284.1:107410258-107410275

ATACCAACATCCTTATCAGCTTTTACGTGC107410258GATGTGAAGGCTGCCCTGGCTCAGTAAGACCTCCCACGCAGTTTCTGA

Martes martes genome assembly, chromosome: 2.
OY734064.1:391708-391725

AATCCATTTATCTATACACTGAGGAACAAG391708GATGTGAAGGCTGCCCTGAGAAGGGCACTGACCAAGGAGTTTTGGATC

Martes martes genome assembly, chromosome: 2.
OY734064.1:439577-439594

AATCCATTTATCTATACACTGAGGAACAAG439577GATGTGAAGGCTGCCCTGAGAAGGGCACTGACCAAGGAGTTTTGGATC

Muntiacus reevesi genome assembly, chromosome: 3.
OZ005626.1:54417431-54417448

AACCCCTCCCTCCTCCTCACCCTGACCTCA54417431GATGTGAAGGCTGCCCTGGGAAGGGTCCCCTGGGGGACAGGGTGTAGG

Streptopelia turtur genome assembly, chromosome: 3.
LR594553.2:11398946-11398963

CCACGTTATTCCCTATATTGGTCTCCCTGT11398946GATGTGAAGGCTGCCCTGCCTTCACTCCTGGAAAACACCATGCCACCC

Geotrypetes seraphini genome assembly, chromosome: 3.
LR699148.1:226811570-226811587

CTGAAGGATGAAATGGTAGGAGTGAGAGTG226811570GATGTGAAGGCTGCCCTGGCGGAGCTCCGTGCGGATGTGGGGGAGTTG

Geotrypetes seraphini genome assembly, chromosome: 5.
LR699150.1:92124831-92124848

CTGAAGGATGAAATGGTAGGAGTGAGAGTG92124831GATGTGAAGGCTGCCCTGGCGGAGCTCCGTGCGGATGTGGGGGAGTTG

Geotrypetes seraphini genome assembly, chromosome: 5.
LR699150.1:143125492-143125509

CTGAAGGATGAAATGGTAGGAGTGAGAGTG143125492GATGTGAAGGCTGCCCTGGCGGAGCTCCGTGCGGATGTGGGGGAGTTG

Geotrypetes seraphini genome assembly, chromosome: 14.
LR699159.1:45000173-45000190

CTGAAGGATGAAATGGTAGGAGTGAGAGTG45000173GATGTGAAGGCTGCCCTGGCGGAGCTCCGTGCGGATGTGGGGGAGTTG

Meleagris gallopavo genome assembly, chromosome: 7.
OW982259.1:1520954-1520971

GAGATGAAAGAGCCGGCAGTGCTCTAAAGG1520954GATGTGAAGGCTGCCCTGTCATTCACGTTTTCTGGGAGCTTGTTCCTG

Meleagris gallopavo genome assembly, chromosome: 7.
OW982298.1:1999623-1999640

GAGATGAAAGAGCCGGCAGTGCTCTAAAGG1999623GATGTGAAGGCTGCCCTGTCATTCACGTTTTCTGGGAGCTTGTTCCTG

Symphodus melops genome assembly, chromosome: 18.
OX393542.1:3438199-3438216

TCAAACGATCAGGAAGTGTAGGGGTGGCTG3438199GATGTGAAGGCTGCCCTGACTTTGGAGGATTCCTTGACTTTGGGTCGA

Tetrao urogallus genome assembly, chromosome: 8.
OX596302.1:28946084-28946101

GAGATGAAAGAGCCGGCAGTGCTCTAAAGG28946084GATGTGAAGGCTGCCCTGTCATTCATGTTTTCTGGGAGCTTGTTCCTG

Labrus mixtus genome assembly, chromosome: 16.
OY757299.1:9023035-9023052

TCAAACGATCAGGAAGTGTGGGGGTGACTG9023035GATGTGAAGGCTGCCCTGACTTTGGAGGATTCCTTGACTTTGGGTCGA

Labrus bergylta genome assembly, chromosome: 19.
OZ005727.1:8145961-8145978

TCAAACGATCAGGAAGTGTGGGGGTGACTG8145961GATGTGAAGGCTGCCCTGACTTTGGAGGATTCCTTTGACTTTGGGTCG

MAG: Deltaproteobacteria bacterium isolate bin63 chromosome.
CP070689.1:2829590-2829607

GAATACGACAATGGTATCGGGGAACAGGAA2829590GATGTGAAGGCTGCCCTGCACTACCTTGCCCAGAGAGGGAAGAAGGTC

Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-165A4.
CT989252.4:130073-130090

GCCCATTACTTGACTTGATAATTTGGGGGA130073GATGTGAAGGCTGCCCTGGCCAAGGTTTTTTAGACATGTCGAAAGGAG

Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone WTSI_1061-26K19.
FO082408.2:23319-23336

GCCCATTACTTGACTTGATAATTTGGGGGA23319GATGTGAAGGCTGCCCTGGCCAAGGTTTTTTAGACATGTCGAAAGGAG

Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-89J9.
FP340591.2:133493-133510

GCCCATTACTTGACTTGATAATTTGGGGGA133493GATGTGAAGGCTGCCCTGGCCAAGGTTTTTTAGACATGTCGAAAGGAG

Aegilops umbellulata cultivar TA1851 chromosome 1U.
CP136054.1:158791116-158791133

GACAACCTCTCGTTTATGTGTGTCTACAGT158791116GATGTGAAGGCTGCCCTGCGTACGGAGCCAATGGCTGTCACGGCACGG

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828087.1:131557713-131557730

TCTCTCCGGTGGTTTATGTGTGTCTACAGT131557713GATGTGAAGGCTGCCCTGCGTACGGAGGTACGGCGCCAATGGCTGGCA

Triticum turgidum subsp. durum genome assembly, chromosome: 1B.
LT934112.1:185546147-185546164

TCTCTCCGGTGGTTTATGAGCGTCTACAGT185546147GATGTGAAGGCTGCCCTGCGTACGGAGCCAATGGCTGTCACGGTCAGA

Avena insularis genome assembly, chromosome: 7C.
OU342344.1:164847937-164847954

CGCGAGTGCGTGCGGCAGCAACTGGTCGCG164847937GATGTGAAGGCTGCCCTGTCGCTGGTGTGACTCCATCGGCCAGATGTG

Avena sativa genome assembly, chromosome: 7C.
OU342391.1:166197793-166197810

CGCGAGTGCGTGCGGCAGCAACTGGTCGCG166197793GATGTGAAGGCTGCCCTGTCGCTGGTGTGACTCCATCGGCCAGATGTG

Triticum aestivum genome assembly, chromosome: 1D.
OV100739.1:140945534-140945551

TCTCTCCGGTGGTTTATGTGTGTCTACAGT140945534GATGTGAAGGCTGCCCTGCGTACGGAGCCAATGGCTGTCACGGCGCGG

Avena sativa genome assembly, chromosome: 14.
OV702292.1:179290732-179290749

CGCGAGTGCGTGCGGCAGCAACTGGTCGCG179290732GATGTGAAGGCTGCCCTGTCGCTGGTGTGACTCCATCGGCCAGATGTG

Triticum aestivum genome assembly, chromosome: 1D.
OW530312.1:140945534-140945551

TCTCTCCGGTGGTTTATGTGTGTCTACAGT140945534GATGTGAAGGCTGCCCTGCGTACGGAGCCAATGGCTGTCACGGCGCGG

Aegilops speltoides subsp. speltoides genome assembly, chromosome: 1B.
OX082597.1:124157408-124157425

TCTCTCCGGTGGTTTATGAGCGTCTACAGT124157408GATGTGAAGGCTGCCCTGCGTACGGAGCCAATGGCTGTCACGGTCAGA

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 1H.
OX459970.1:137701833-137701850

TCTCTCCGGTGGTTTATGTGTGTCTACAGT137701833GATGTGAAGGCTGCCCTGCGTACGGAGGTACGGCGCCAATGGCTGGCA

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 1H.
OX460026.1:172765419-172765436

TCTCTCCGGTGGTTTATGTGTGTCTACAGT172765419GATGTGAAGGCTGCCCTGCGTACGGAGGTACGGCGCCAATGGCTGGCA

Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737474.1:136424178-136424195

TCTTTGCGGTGGTTTATGTGTGTCTACAGT136424178GATGTGAAGGCTGCCCTGCGTACGGAGCCAATGGCTGGCACGGTCAAA

Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737496.1:137174887-137174904

TCTTTGCGGTGGTTTATGTGTGTCTACAGT137174887GATGTGAAGGCTGCCCTGCGTACGGAGCCAATGGCTGGCACGGTCAGA

Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737625.1:136534735-136534752

TCTTTGCGGTGGTTTATGTGTGTCTACAGT136534735GATGTGAAGGCTGCCCTGCGTACGGAGCCAATGGCTGGCACGGTCAGA

Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737647.1:127081337-127081354

TCTTTGCGGTGGTTTATGTGTGTCTACAGT127081337GATGTGAAGGCTGCCCTGCGTACGGAGCCAATGGCTGGCACGGTCAGA

Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737880.1:128521832-128521849

TCTTTGCGGTGGTTTATGTGTGTCTACAGT128521832GATGTGAAGGCTGCCCTGCGTACGGAGCCAATGGCTGGCACGGTCAGA

Triticum timopheevii genome assembly, chromosome: 1At.
OY997261.1:184685812-184685829

TCTCTCCGGTGGTTTATCTGTGTCTACAGT184685812GATGTGAAGGCTGCCCTGCGTACGGAGCCAATGGCTGTCACGGCGCGG

Sphingobium sp. YBL2, complete genome.
CP010954.1:1653265-1653282

CCGCCCGAGCTCAGCCCCGCAGAATGGCAC1653265GATGTGAAGGCTGCCCTGATCGCGGTGGCCGATTGCGGCTGCGGTGAT

Acetobacter tropicalis strain BDGP1 chromosome, complete genome.
CP022699.1:1060879-1060896

GACCAGATTACCCGCTATGCCCGTGCCGCA1060879GATGTGAAGGCTGCCCTGCGCATTCTGGCGTTGCTGGTGCCGGAATTC

Serratia ureilytica strain T6 chromosome, complete genome.
CP071320.1:1945915-1945932

CTGCATGACGTCTGCGGCATCGTCTTCATT1945915GATGTGAAGGCTGCCCTGGTAGATCAACAGCATTTGTTCGCGATGGGG

Pterostichus madidus genome assembly, chromosome: 8.
OU452308.1:7763358-7763375

AGCAGGAACTAAGAAAGGAACGCCCATAGA7763358GATGTGAAGGCTGCCCTGTTGCTAATGATGTGATGATGGAATTTTTCA

Sciurus carolinensis genome assembly, chromosome: 2.
LR738591.1:96314694-96314711

CTACCACCACCAAGGCCTTCTCCCAGGTCC96314694CAGGGCAGCCTTCACATCTGTCAGGGCCTCAGAAACAGGGAGGCTGAG

Sus scrofa scrofa breed NS chromosome 7.
CP071558.1:121379260-121379277

CTCCTTTCGACATGTCTAAAAAACCTTGGC121379260CAGGGCAGCCTTCACATCTCCCCCAAATTATCAAGTCAAGTAATGGGC

Geotrypetes seraphini genome assembly, chromosome: 1.
LR699146.1:351957393-351957410

CAACTCCCCCACATCCGCACGGAGCTCCGC351957393CAGGGCAGCCTTCACATCCACTCTCACTCCTACCATTTCATCCTTCAG

uncultured Gammaproteobacteria bacterium genome assembly, chromosome: 1.
OY282353.1:3002019-3002036

ACGATATATCGCGGGGACGTGGTCATCGAC3002019CAGGGCAGCCTTCACATCCTCGGCGACACCGTGACCATCCGGTTCGAC

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
HG994374.1:136428651-136428668

TGCCAGCCATTGGCGCCGTACCTCCGTACG136428651CAGGGCAGCCTTCACATCACTGTAGACACACATAAACCACCGGAGAGA

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828094.1:152430194-152430211

TGCCAGCCATTGGCGCCGTACCTCCGTACG152430194CAGGGCAGCCTTCACATCACTGTAGACACACATAAACCACCGGAGAGA

Triticum aestivum genome assembly, chromosome: 1A.
LR865500.1:149991794-149991811

CCGCGCCGTGACAGCCATTGGCTCCGTACG149991794CAGGGCAGCCTTCACATCACTGTAGACACACATAAACCACCGGAGAGA

Triticum aestivum genome assembly, chromosome: 1A.
OU343169.1:160905487-160905504

CCGCGCCGTGACAGCCATTGGCTCCGTACG160905487CAGGGCAGCCTTCACATCACTGTAGACACACATAAACCACCGGAGAGA

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OX459902.1:159260823-159260840

TGCCAGCCATTGGCGCCGTACCTCCGTACG159260823CAGGGCAGCCTTCACATCACTGTAGACACACATAAACCACCGGAGAGA

Hordeum vulgare genome assembly, chromosome: 1H.
OX460124.1:162474527-162474544

TGCCAGCCATTGGCGCCGTACCTCCGTACG162474527CAGGGCAGCCTTCACATCACTGTAGACACACATAAACCACCGGAGAGA

Triticum aestivum genome assembly, chromosome: 1A.
OX637225.1:117877279-117877296

CCGCGCCGTGACAGCCATTGGCTCCGTACG117877279CAGGGCAGCCTTCACATCACTGTAGACACACATAAACCACCGGAGAGA

Hordeum bulbosum genome assembly, chromosome: 1H_4.
OY737481.1:144875679-144875696

TCTGACCGTGCCAGCCATTGGCTCCGTACG144875679CAGGGCAGCCTTCACATCAATGTAGACACACATAAACCACCGCAAAGA

Serratia marcescens SL267 DNA, complete genome.
AP024916.1:3043361-3043378

CCCCATCGCGAACAAATGCTGTTGATCTAC3043361CAGGGCAGCCTTCACATCAATGAAGACGATGCCGCAGACGTCATGCAG

Serratia sp. LS-1 chromosome, complete genome.
CP033504.1:2462280-2462297

CCCCATCGCGAACAAATGCTGTTGATCTAC2462280CAGGGCAGCCTTCACATCAATGAAGACGATGCCGCAGACGTCATGCAG

Rhodococcus koreensis strain R85 chromosome, complete genome.
CP070609.1:543824-543841

CACCAGGAGCGGGTCCACTCCCGCCGTTTC543824CAGGGCAGCCTTCACATCCGCGTCCAGCTTCATCAGACTCTTGTATAC

Sphingobium sp. YC-XJ3 chromosome, complete genome.
CP117471.1:4475185-4475202

ATCACCGCAGCCGCAATCGGCCACCGCGAT4475185CAGGGCAGCCTTCACATCGTGCCATTCTGCGGGGCTGAGCTCGGGCGG

Agriotes lineatus genome assembly, chromosome: 3.
OW679196.1:32594198-32594215

GATTTTGTCAAGCCCTTCAAAATGTTCAAT32594198CAGGGCAGCCTTCACATCCTCATCTGTTGAAAAGTTCTGGTGTGCAAG

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Debug Info:

0.009 | 0.009 | search_start;
0.191 | 0.182 | search_plus_done; http://172.18.8.135:50400/match?q=GATGTGAAGGCTGCCCTG&k=0&no_gap=0&offset=0&limit=50
0.277 | 0.086 | search_minus_done; http://172.18.8.135:50400/match?q=CAGGGCAGCCTTCACATC&k=0&no_gap=0&offset=0&limit=1
0.288 | 0.011 | cgi_end;

Summary:

Results:

Data Export:

Debug Info: