GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 03:14:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

LJGAE94TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA sequence.
GO008404.1:227-246
GGTTCCGCGCTGAACTTGATCGATTAAAGT227GATTCTGCCTTCTCCAAACGACCCTTTGACTAGATAATCACACCACCATC
Lotus japonicus clone JCVI-FLLj-16K1 unknown mRNA.
BT137229.1:227-246
GGTTCCGCGCTGAACTTGATCGATTAAAGT227GATTCTGCCTTCTCCAAACGACCCTTTGACTAGATAATCACACCACCATC
Lotus japonicus genomic DNA, chromosome 2, clone: LjB02I05, BM1153.
AP007849.2:61899-61918
GATGGTGGTGTGATTATCTAGTCAAAGGGT61899CGTTTGGAGAAGGCAGAATCACTTTAATCGATCAAGTTCAGCGCGGAACC
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:81665987-81666006
GATGGTGGTGTGATTATCTAGTCAAAGGGT81665987CGTTTGGAGAAGGCAGAATCACTTTAATCGATCAAGTTCAGCGCGGAACC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GATTCTGCCTTCTCCAAACG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GATTCTGCCTTCTCCAAACG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.179 | 0.170 | search_plus_done; http://172.18.8.135:50400/match?q=GATTCTGCCTTCTCCAAACG&k=0&no_gap=0&offset=0&limit=50
0.196 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=CGTTTGGAGAAGGCAGAATC&k=0&no_gap=0&offset=0&limit=48
0.197 | 0.001 | cgi_end;

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