GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 08:23:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Avena sativa genome assembly, chromosome: 2D.
OU342393.1:339890786-339890805
GCACCAGCCTTGGGAACGCTCCCAGACCTG339890786GCAACATCAGATTCGCCCAACTGACCCACTGATGCAGGTGTCATTGTTGG
Avena sativa genome assembly, chromosome: 2D.
OU342393.1:436104681-436104700
GCACCAGCCTTGGTAACGCTCCCAGACCCG436104681GCAACATCAGATTCGCCCAACTGACCCACCGAAGTAGGTGTCATTGTTGG
Avena sativa genome assembly, chromosome: 16.
OV702294.1:351922439-351922458
GCACCAGCCTTGGGAACGCTCCCAGACCTG351922439GCAACATCAGATTCGCCCAACTGACCCACTGATGCAGGTGTCATTGTTGG
Avena sativa genome assembly, chromosome: 16.
OV702294.1:450511167-450511186
GCACCAGCCTTGGTAACGCTCCCAGACCCG450511167GCAACATCAGATTCGCCCAACTGACCCACCGAAGTAGGTGTCATTGTTGG
Dichetophora obliterata genome assembly, chromosome: 1.
OY986435.1:135418810-135418829
ATTTGCTACTCTTCTGTTTTTAAACACAGC135418810GCAACATCAGATTCGCCCAAAAAGGTCGAAGCTTGTCCAATAAGGAATCT
Dichetophora obliterata genome assembly, chromosome: 1.
OY986435.1:135431724-135431743
ATTTGCTACTCTTCTGTTTTTAAACACAGC135431724GCAACATCAGATTCGCCCAAAAAGGTCGAAGCTTGTCCAATAAGGAATCT
Avena insularis genome assembly, chromosome: 2D.
OU342346.1:244133017-244133036
CCAACAATGACACCTACTTCGGTGGGTCAG244133017TTGGGCGAATCTGATGTTGCCGGGTCTGGGAGCGTTACCAAGGCTGGTGC
Pyrus communis genome assembly, chromosome: 9.
OY757076.1:9728154-9728173
CATGCTGTTTTTTTATATAAGATCTTAATC9728154TTGGGCGAATCTGATGTTGCAGGTATGTGCAAAATAATATGTTAACCGGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCAACATCAGATTCGCCCAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAACATCAGATTCGCCCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.089 | 0.080 | search_plus_done; http://172.18.8.135:50400/match?q=GCAACATCAGATTCGCCCAA&k=0&no_gap=0&offset=0&limit=50
0.106 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGGCGAATCTGATGTTGC&k=0&no_gap=0&offset=0&limit=44
0.107 | 0.001 | cgi_end;

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