GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 10:54:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capnocytophaga sputigena strain KC1668 chromosome, complete genome.
CP022385.1:1244199-1244218
AAGCCTTGTTGAATTTGCAAACAGAACTGG1244199GCAACGACACTTTTGAGCAAACCAAACAAAAGGCTCTCAATCTTTGGGAA
Sequence 72270 from Patent EP2761003.
JC686489.1:241-260
GAAATTGATTTCAACGTGTATCTTTTCGTC241TTGCTCAAAAGTGTCGTTGCACCACACTCTCTCTCTCTCTCTCTCTCTCA
UDP96-003 AC- and AG-enriched peach leaf genomic libraries Prunus persica STS genomic clone peach-ac 4, sequence tagged site.
BV079690.1:29-48
AATTGATTTCAACGTGTATCTTTTCGTC29TTGCTCAAAAGTGTCGTTGCACCACACTCTCTCTCTCTCTCTCTCTCTCA
Prunus dulcis DNA, pseudomolecule Pd04.
AP019300.1:8904270-8904289
GAAATTGATTTCAACGTGTATCTTTTCGTC8904270TTGCTCAAAAGTGTCGTTGCACTACTCTCTCTCTCTCTCTCTCTCTCTCT
Capnocytophaga sputigena strain D1179 chromosome, complete genome.
CP022379.1:2255358-2255377
TTCCCAAAGAGCGAGAGCCTTTTGTTTTGT2255358TTGCTCAAAAGTGTCGTTGCCCAGTTCTGTTTGGAGGTTCAATAAGGCTT
Capnocytophaga sputigena strain H4486 chromosome, complete genome.
CP022383.1:2454920-2454939
TTCCCAAAGAGCGAGAGCCTTTTGTTTTGT2454920TTGCTCAAAAGTGTCGTTGCCCAGTTCTGTTTGGAGGTTCAATAAGGCTT
Capnocytophaga sputigena strain NCTC11097 genome assembly, chromosome: 1.
LR134489.1:2335540-2335559
TTCCCAAAGAGCGAGAGCCTTTTGTTTTGT2335540TTGCTCAAAAGTGTCGTTGCCCAGTTCTGTTTGGAGGTTCAATAAGGCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCAACGACACTTTTGAGCAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAACGACACTTTTGAGCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.089 | 0.080 | search_plus_done; http://172.18.8.135:50400/match?q=GCAACGACACTTTTGAGCAA&k=0&no_gap=0&offset=0&limit=50
0.143 | 0.054 | search_minus_done; http://172.18.8.135:50400/match?q=TTGCTCAAAAGTGTCGTTGC&k=0&no_gap=0&offset=0&limit=49
0.147 | 0.004 | cgi_end;

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