GGGenome | Results

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2025-04-14 02:52:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Sequence 12571 from patent US 9012723.
HK576225.1:1058-1079

CTATGATGCTAAATGCTACTGTGGAAGATG1058GCACAATGGGTTATGATGTTGCGATGGAGATGGCGCCGGAGGTTCAGATGAA

Sequence 62601 from patent US 9029636.
HK971664.1:1130-1151

CTACGATGGTAAATGCTGCTGTGGAAGATG1130GCACAATGGGTTATGATGTTGCGATGGAGATGGCGCCGGAGGTTCAGATGAA

Sequence 100490 from patent US 9029636.
HL009554.1:512-533

CTATGATGCTAAATGCTACTGTGGAAGATG512GCACAATGGGTTATGATGTTGCGATGGAGATGGCGCCGGAGGTTCAGATGAA

454GmaGlobSeed317132 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK582500.1:79-100

CTACGATGGTAAATGCTGCTGTGGAAGATG79GCACAATGGGTTATGATGTTGCGATGGAGATGGCGCCGGAGGTTCAGATGAA

454GmaGlobSeed412596 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD669947.1:113-134

CTACGATGGTAAATGCTGCTGTGGAAGATG113GCACAATGGGTTATGATGTTGCGATGGAGATGGCG

454GmaGlobSeed416955 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD674306.1:77-98

CTACGATGGTAAATGCTGCTGTGGAAGATG77GCACAATGGGTTATGATGTTGCGATGGAGATGGCG

454GmaGlobSeed421341 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD678692.1:77-98

CTACGATGGTAAATGCTGCTGTGGAAGATG77GCACAATGGGTTATGATGTTGCGATGGAGATGGCG

454GmaGlobSeed478662 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD736013.1:111-132

CTACGATGGTAAATGCTGCTGTGGAAGATG111GCACAATGGGTTATGATGTTGCGATGGAGATGGCG

454GmaGlobSeed544141 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD801492.1:77-98

CTACGATGGTAAATGCTGCTGTGGAAGATG77GCACAATGGGTTATGATGTTGCGATGGAGATGGCG

454GmaGlobSeed581215 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD838566.1:70-91

CTACGATGGTAAATGCTGCTGTGGAAGATG70GCACAATGGGTTATGATGTTGCGATGGAGATGGCGCCGGAGGTTCAGATGAA

454GmaGlobSeed620479 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD877830.1:82-103

CTACGATGGTAAATGCTGCTGTGGAAGATG82GCACAATGGGTTATGATGTTGCGATGGAGATGGCG

454GmaGlobSeed663586 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD920937.1:77-98

CTACGATGGTAAATGCTGCTGTGGAAGATG77GCACAATGGGTTATGATGTTGCGATGGAGATGGCG

454GmaGlobSeed686223 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD943574.1:78-99

CTACGATGGTAAATGCTGCTGTGGAAGATG78GCACAATGGGTTATGATGTTGCGATGGAGATGGCGCCGGAGGTTCAGATGAA

GM_WBb0029G03.r GM_WBb Glycine max genomic clone GM_WBb0029G03 3', genomic survey sequence.
ED691782.1:699-720

CTACGATGGTAAATGCTGCTGTGGAAGATG699GCACAATGGGTTATGATGTTGCGATGGAGATGGCGCCGGAGGTTCAGATGAA

Glycine max cultivar Williams 82 chromosome 19.
CP126444.1:13844494-13844515

CTACGATGGTAAATGCTGCTGTGGAAGATG13844494GCACAATGGGTTATGATGTTGCGATGGAGATGGCGCCGGAGGTTCAGATGAA

454GmaGlobSeed105403 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK370771.1:73-94

TTCATCTGAACCTCCGGCGCCATCTCCATC73GCAACATCATAACCCATTGTGCCATCTTCCACAGCAGCATTTACCATCGTAG

454GmaGlobSeed490095 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD747446.1:121-142

TTCATCTGAACCTCCGGCGCCATCTCCATC121GCAACATCATAACCCATTGTGCCATCTTCCACAGCAGCATTTACCATCGTAG

GM_WBa0091G14.r GM_WBa Glycine max genomic clone GM_WBa0091G14 3', genomic survey sequence.
ED664873.1:338-359

TTCATCTGAACCTCCGGCGCCATCTCCATC338GCAACATCATAACCCATTGTGCCATCTTCCACAGCAGCATTTACCATCGTAG

GSS_Ba127C21.R GSS_Ba Glycine soja genomic 3', genomic survey sequence.
HN084145.1:340-361

TTCATCTGAACCTCCGGCGCCATCTCCATC340GCAACATCATAACCCATTGTGCCATCTTCCACAGCAGCATTTACCATCGTAG

GD_TBa090D21.F GD_TBa Glycine dolichocarpa genomic 5', genomic survey sequence.
HN571028.1:107-128

TTCATCTGAACCTCCGGCGCCATCTCCGTC107GCAACATCATAACCCATTGTGCCATCTTCAACAGCAGCATTCAGCATCATAG

GS_Ba089F15.R GS_Ba Glycine syndetika genomic 3', genomic survey sequence.
HN873136.1:326-347

TTCATCTGAACCTCCGGCGCCATCTCCATC326GCAACATCATAACCCATTGTGCCATCTTCCACAGCAGTATTCAGCATCACAG

Glycine max cultivar Williams 82 chromosome 16.
CP126441.1:7281325-7281346

TTCATCTGAACCTCCGGCGCCATCTCCATC7281325GCAACATCATAACCCATTGTGCCATCTTCCACAGTAGCATTTAGCATCATAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

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Debug Info:

0.009 | 0.009 | search_start;
0.933 | 0.923 | search_plus_done; http://172.18.8.135:50400/match?q=GCACAATGGGTTATGATGTTGC&k=0&no_gap=0&offset=0&limit=50
1.266 | 0.333 | search_minus_done; http://172.18.8.135:50400/match?q=GCAACATCATAACCCATTGTGC&k=0&no_gap=0&offset=0&limit=35
1.271 | 0.005 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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