GGGenome | Results

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2025-04-10 22:30:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Daucus carota subsp. sativus cultivar DH1 chromosome 4.
CP093346.1:44685308-44685327

GAATTCATGGTACTGGGGAATTTACGGTAC44685308ATCAGGTCGTATTGGCGTGCTACTCTTTAAAGTCACATTAGGCTGGCCTT

Daucus carota isolate Kuroda chromosome 4.
CP125304.1:32974302-32974321

GAATTCATGGTACTGGGGAATTTACGGTAC32974302ATCAGGTCGTATTGGCGTGCTACTCTTTAAAGTCACATTAGGCTGGCCTT

Bradyrhizobium brasilense strain CB627 chromosome, complete genome.
CP121646.1:319319-319338

GGTTCTGCCGCGCCCATCTCGGCGAGGGCG319319ATCAGGTCGTATTGGCGTGCCTGAAGGAGCATCGCAGCCGCCTCAGCAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=GCACGCCAATACGACCTGAT&k=0&no_gap=0&offset=0&limit=50
0.135 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=ATCAGGTCGTATTGGCGTGC&k=0&no_gap=0&offset=0&limit=50
0.137 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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