GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 21:36:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

lky33g07.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ061756.1:390-415
ATGAGCGTGTCTTTGGGCAAGGTTATGTGA390GCACTGGTGGTTTTGGTAAATCCCATTTCTAACTCTTTATCTTCATACAGACATGC
Brassica napus cultivar Xiang5A chromosome 12.
CP123887.1:7267331-7267356
ATGAGCGTGTCTTTGGGCAAGGTTATGTGA7267331GCACTGGTGGTTTTGGTAAATCCCATTTCTAACTCTTTATCTTCATACAGACATGC
Brassica oleracea HDEM genome, scaffold: C6.
LR031880.1:3594250-3594275
ATGAGCGTGTCTTTGGGCAAGGTTATGTGA3594250GCACTGGTGGTTTTGGTAAATCCCATTTCTAACTCTTTATCTTCATACAGACATGC
BOICS16TF BO_1.4_1.6_KB_nuc Brassica oleracea genomic clone BOICS16, genomic survey sequence.
CC951590.1:329-354
GCATGTCTGTATGAAGATAAAGAGTTAGAA329ATGGGATTTACCAAAACCACCAGTGCTCACATAACCTTGCCCAAAGACACGCTCAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCACTGGTGGTTTTGGTAAATCCCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACTGGTGGTTTTGGTAAATCCCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=GCACTGGTGGTTTTGGTAAATCCCAT&k=0&no_gap=0&offset=0&limit=50
0.129 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=ATGGGATTTACCAAAACCACCAGTGC&k=0&no_gap=0&offset=0&limit=47
0.129 | 0.001 | cgi_end;

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