GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:59:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Medicago truncatula clone mth2-11p13, complete sequence.
AC144375.14:78261-78284
TTGTATGATCAGTTTGACAATATCTACATT78261GCACTTCACCATATCCTATGGGCTTGGGGCTGCTGCTAGGTATGTTCCTAACTT
Medicago truncatula clone JCVI-FLMt-18P10 unknown mRNA.
BT137214.1:1009-1032
TCTTTCTATATGTTTGATAATATCTACATT1009GCACTTCACCATATCCTATGGGCTTGGGGCTGCTGCTAGCACAAGAATTTCAAA
METCW82TR JCVI-MT3 Medicago truncatula cDNA 3', mRNA sequence.
GT144841.1:667-690
TTTGAAATTCTTGTGCTAGCAGCAGCCCCA667AGCCCATAGGATATGGTGAAGTGCAATGTAGATATTATCAAACATATAGAAAGA
Medicago arabica genome assembly, chromosome: 6.
OX326969.1:42904015-42904038
AAGTTAGAAACATACCTAGCTGCAGCCCCA42904015AGCCCATAGGATATGGTGAAGTGCAATGTAGATATTGTCAAACTGATCATACAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCACTTCACCATATCCTATGGGCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACTTCACCATATCCTATGGGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.092 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=GCACTTCACCATATCCTATGGGCT&k=0&no_gap=0&offset=0&limit=50
0.208 | 0.116 | search_minus_done; http://172.18.8.135:50400/match?q=AGCCCATAGGATATGGTGAAGTGC&k=0&no_gap=0&offset=0&limit=48
0.209 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).