GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 12:38:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Acrocephalus scirpaceus scirpaceus genome assembly, chromosome: 15.
OU383788.1:13174727-13174744
CTCTGCCACACTTCGGGAAAAGTTCTTCAT13174727GCAGAGGTGGAACTTGTGTGTTTGTTTATGGGCATTGCTCCTCATCCT
Zeus faber genome assembly, chromosome: 2.
OY482846.1:2789857-2789874
TCCCCATCTCACCCTGAAGGTGTCCGGGGA2789857GCAGAGGTGGAACTTGTGCCGGATGTCCTCCGAGGCCCCAGCACACAG
Fringilla coelebs genome assembly, chromosome: 20.
OY740744.1:4289015-4289032
CAGCTGAAAGGATTCATGCAGGGCAGCCAG4289015GCAGAGGTGGAACTTGTGATGCCACTTGGTGTGGCCACTATTCTTGCT
Neolamprologus multifasciatus genome assembly, chromosome: 7.
OY755016.1:33956125-33956142
TAAACAAGCTGTATCTTTACTTGACGCAAA33956125GCAGAGGTGGAACTTGTGCAAAATATATGTCAGGTTTCATATCATTGC
Sequence 9138 from Patent WO2008034648.
FB789865.1:670-687
GACAAGCTCTCTCTGCCCAAGAACACCAAA670GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Sequence 18269 from Patent WO2008034648.
FB798996.1:670-687
GACAAGCTCTCTCTGCCCAAGAACACCAAA670GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Sequence 35863 from Patent WO2008034648.
FB816590.1:670-687
GACAAGCTCTCTCTGCCCAAGAACACCAAA670GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Sequence 40426 from Patent WO2008034648.
FB821153.1:670-687
GACAAGCTCTCTCTGCCCAAGAACACCAAA670GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Sequence 50048 from Patent WO2008034648.
FB830775.1:670-687
GACAAGCTCTCTCTGCCCAAGAACACCAAA670GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Sequence 97267 from Patent WO2008034648.
FB877994.1:670-687
GACAAGCTCTCTCTGCCCAAGAACACCAAA670GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Sequence 9138 from Patent EP2090662.
HB659924.1:670-687
GACAAGCTCTCTCTGCCCAAGAACACCAAA670GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Sequence 18269 from Patent EP2090662.
HB669055.1:670-687
GACAAGCTCTCTCTGCCCAAGAACACCAAA670GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Sequence 35863 from Patent EP2090662.
HB686649.1:670-687
GACAAGCTCTCTCTGCCCAAGAACACCAAA670GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Sequence 40426 from Patent EP2090662.
HB691212.1:670-687
GACAAGCTCTCTCTGCCCAAGAACACCAAA670GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Sequence 50048 from Patent EP2090662.
HB700834.1:670-687
GACAAGCTCTCTCTGCCCAAGAACACCAAA670GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Sequence 97267 from Patent EP2090662.
HB748053.1:670-687
GACAAGCTCTCTCTGCCCAAGAACACCAAA670GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Rattus norvegicus clone CH230-117F21, WORKING DRAFT SEQUENCE, 5 unordered pieces.
AC107344.4:159054-159071
GGGGTTGCTCAGAGTGGCTGAGGAAGCCAG159054GCAGAGGTGGAACTTGTGAGTGTTGGAGGCAGATGTTGAGCCAGGCCT
Rattus norvegicus clone CH230-325O6, WORKING DRAFT SEQUENCE, 3 ordered pieces.
AC119116.4:12793-12810
GGGGTTGCTCAGAGTGGCTGAGGAAGCCAG12793GCAGAGGTGGAACTTGTGAGTGTTGGAGGCAGATGTTGAGCCAGGCCT
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 88 unordered pieces.
FJ789648.1:575440-575457
ACAATATTTATCGCAACAACCTTGGAAGCA575440GCAGAGGTGGAACTTGTGTCAAGGAAAAGATCGTTCAAGAGAGCAGAC
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:787926-787943
GCAAGATTCATAGGAGATGGTGATGAACAT787926GCAGAGGTGGAACTTGTGGTGGACACCGGAAGTGAGATTCTGTGGAGT
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:962149-962166
GCAAGATTCATAGGAGATGGTGATGAACAT962149GCAGAGGTGGAACTTGTGGTGGACACCGGAAGTGAGATTCTGTGGAGT
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:1736811-1736828
AGATTCATCATAGGAGATGGTGATGAACAT1736811GCAGAGGTGGAACTTGTGGTGGACACCGGAAGTGAGATTCTGTGGAGT
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:1759993-1760010
AGATTCATCATAGGAGATGGTGATGAACAT1759993GCAGAGGTGGAACTTGTGGTGGACACCGGAAGTGAGATTCTGTGGAGT
Debaryomyces hansenii strain D2 chromosome 5, complete sequence.
CP046880.1:709902-709919
GACAAGCTCTCTCTGCCCAAGAACACCAAA709902GCAGAGGTGGAACTTGTGGCGGTTAAGGACAATTTGATTGAAAAGATG
Papaver somniferum cultivar Roxanne chromosome 5.
CP048217.1:18213465-18213482
GAGATGGAGCAGTGGTAAGGAAGAGGCTAG18213465GCAGAGGTGGAACTTGTGTAGGAGAACGAGATTGATTGTGTAGGAAGT
Brassica napus genome assembly, chromosome: A07.
HG994361.1:161029-161046
ACAATATTTATCGCAACAACCTTGGAAGCA161029GCAGAGGTGGAACTTGTGTCAAGGAAAAGATCGTTCAAGAGAGCAGAC
Brassica napus genome assembly, chromosome: C07.
HG994371.1:607244-607261
ACAACATTTATCGCAACAACCTTGGAAGCA607244GCAGAGGTGGAACTTGTGTCGAGGAAAAGATCGTTCAAGAGAGCATAC
Brassica rapa genome, scaffold: A07.
LR031574.1:188965-188982
ACAATATTTATCGCAACAACCTTGGAAGCA188965GCAGAGGTGGAACTTGTGTCAAGGAAAAGATCGTTCAAGAGAGCAGAC
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:2946659-2946676
ACAACATTTATCGCAACAACCTTGGAAGCA2946659GCAGAGGTGGAACTTGTGTCGAGGAAAAGATCGTTCAAGAGAGCATAC
Triticum aestivum genome assembly, chromosome: 7B.
LR862569.1:115017550-115017567
CGGGTGGAGTCACGGGAATAGACCGGGGTG115017550GCAGAGGTGGAACTTGTGGCTTGGTAGGAGAGGGTGGCGCGGAAGCAG
Triticum aestivum genome assembly, chromosome: 5B.
LR865492.1:684324216-684324233
CGGGTGGAGTCACGGGAATAGACCGGGGTG684324216GCAGAGGTGGAACTTGTGGCTTGGTAGGAGAGGGTGGCGCGGAAGCAG
Triticum aestivum genome assembly, chromosome: 5B.
LR877322.1:685128331-685128348
CGGGTGGAGTCACGGGAATAGACCGGGGTG685128331GCAGAGGTGGAACTTGTGGCTTGGTAGGAGAGGGTGGCGCGGAAGCAG
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:190848-190865
ACAATATTTATCGCAACAACCTTGGAAGCA190848GCAGAGGTGGAACTTGTGTCAAGGAAAAGATCGTTCAAGAGAGCAGAC
Triticum aestivum genome assembly, chromosome: 5B.
OU015734.1:693371030-693371047
CGGGTGGAGTCACGGGAATAGACCGGGGTG693371030GCAGAGGTGGAACTTGTGGCTTGGTAGGAGAGGGTGGCGCGGAAGCAG
Triticum aestivum genome assembly, chromosome: 7B.
OU015740.1:741496167-741496184
CGGGTGGAGTAACGGGAATAGACTGGGGTG741496167GCAGAGGTGGAACTTGTGGCTTGGTAGGAGAGGGTGGCGCGGAAGCAG
Triticum aestivum genome assembly, chromosome: 5B.
OU343180.1:699574288-699574305
CGGGTGGAGTCACGGGAATAGACCGGGGTG699574288GCAGAGGTGGAACTTGTGGCTTGGTAGGAGAGGGTGGCGCGGAAGCAG
Triticum aestivum genome assembly, chromosome: 7B.
OV100756.1:743606146-743606163
CGGGTGGAGTAACGGGAATAGACTGGGGTG743606146GCAGAGGTGGAACTTGTGGCTTGGTAGGAGAGGGTGGCGCGGAAGCAG
Triticum aestivum genome assembly, chromosome: 7B.
OW530329.1:743606146-743606163
CGGGTGGAGTAACGGGAATAGACTGGGGTG743606146GCAGAGGTGGAACTTGTGGCTTGGTAGGAGAGGGTGGCGCGGAAGCAG
Sambucus nigra genome assembly, chromosome: 5.
OX422211.1:438250514-438250531
AATTCATGTCGAAATCTACAGCTGACATTT438250514GCAGAGGTGGAACTTGTGTTGGAATTTAACATTCGGATAAAGAATTAA
Anaerocolumna cellulosilytica SN021 DNA, complete genome.
AP023367.1:1993694-1993711
ACCGTACCGCTGAAAGAGTTTGATTATAAC1993694GCAGAGGTGGAACTTGTGAATCCGGTGGCGGATACGGTGGCAACGGCT
Laothoe populi genome assembly, chromosome: Z.
HG992149.1:11531868-11531885
TCTCATACTTGTACATCCTCTAAAAGGTAG11531868GCAGAGGTGGAACTTGTGCCCCTAAAGTTCGCAGAGCATTCGCCAGAA
Mimas tiliae genome assembly, chromosome: Z.
HG995239.1:22310209-22310226
GCTCACGGCATCCCCGAAGGTGGGAAGTAG22310209GCAGAGGTGGAACTTGTGCACCCACGGTACACCGCGCCCTTCCCCGTC
Craniophora ligustri genome assembly, chromosome: 28.
LR990983.1:1786928-1786945
ACATCACGCCTATCGTTCTAGAAAGGTTAA1786928GCAGAGGTGGAACTTGTGGTCGCATTGCTAAGATATTCTTGGGTTCTA
Syritta pipiens genome assembly, chromosome: 1.
LR994571.1:6872357-6872374
TTCACGCGAACTTGTAAATATTAACCACAC6872357GCAGAGGTGGAACTTGTGAATTATGAGCCAAAACAACAAACATAACGA
Melanostoma mellinum genome assembly, chromosome: 1.
OU612058.1:128499470-128499487
CTAACATCGCCCTCCCCTTACACACAGAAG128499470GCAGAGGTGGAACTTGTGGGTGGTTCAACAATGGGTGGATTGGATATG
Cheilosia pagana genome assembly, chromosome: 5.
OW386170.1:24242129-24242146
CACGGTGATGAGACGAAGTCATTGCTGCCG24242129GCAGAGGTGGAACTTGTGTCGTTGGTGGCGGTTGCGACGGCTTGGGGC
Rhogogaster chlorosoma genome assembly, chromosome: 6.
OX101802.1:14392274-14392291
ATCAAACATATCGCGCAGGGCTCTGGCACA14392274GCAGAGGTGGAACTTGTGATTAGCAGCTCCCTGCCATTGGAGTTTTAA
Brachypalpus laphriformis genome assembly, chromosome: 3.
OX246755.1:134617800-134617817
CACGATGGTAAGACGATGTCATTGCAGCTG134617800GCAGAGGTGGAACTTGTGTCGTTGGCGGTGGCTGTGGTGGTTGCAGTT
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: III.
OX377203.1:10595537-10595554
TCTGAATGTGACAGTTCGACTTTCAGTATC10595537GCAGAGGTGGAACTTGTGTGTCGTCGTCCGATTCGGTGATCTCACCCG
Callimorpha dominula genome assembly, chromosome: 10.
OX457000.1:7522405-7522422
CTGTTCTTGTTCTCAGGAACAGTTCGAACA7522405GCAGAGGTGGAACTTGTGTTAAAGTATCACTTCCTGCCAGCGGAAGAT
Criorhina ranunculi genome assembly, chromosome: 2.
OX638382.1:63689235-63689252
TCTCACAACCATAGTCTGTACACACGGAAG63689235GCAGAGGTGGAACTTGTGGGTGGGTTAACAATGGGAGTGAGCGGTATA
Ferdinandea cuprea genome assembly, chromosome: 1.
OY754958.1:26772104-26772121
CGCGATGGTGAGACGATGTCATTGCGGCTG26772104GCAGAGGTGGAACTTGTGTCGATGGTGGTGGCTGCGAAGGCTTAGGGC
Drosophila limbata genome assembly, chromosome: X.
OZ001351.1:32833195-32833212
GGCAGTGCACTTGGCGCGGGCTTCGAGTCA32833195GCAGAGGTGGAACTTGTGGAACTCGAAGCCGACGTCACCTGTTGCTGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCAGAGGTGGAACTTGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGAGGTGGAACTTGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.374 | 0.366 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGAGGTGGAACTTGTG&k=0&no_gap=0&offset=0&limit=50
0.427 | 0.052 | search_minus_done; http://172.18.8.135:50400/match?q=CACAAGTTCCACCTCTGC&k=0&no_gap=0&offset=0&limit=0
0.427 | 0.000 | cgi_end;

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