GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 12:46:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES04E15, 5' end sequence.
FY383713.1:423-442
AGAAACAATTCGGGTCAATTTGACCCGGGT423GCAGCACCACCATTTAGGATAGGTGATATCCGAAATGCGATACCGAAACA
Dianthus caryophyllus mRNA, clone: CES21_M18, 5' end sequence.
FY390327.1:527-546
AGAAACAATTCGGGTCAATTTGACCCGGGT527GCAGCACCACCATTTAGGATAGGTGATATCCGAAATGCGATACCGAAACA
Dianthus caryophyllus mRNA, clone: CES28N07, 5' end sequence.
FY392967.1:512-531
AGAAACAATTCGGGTCAATTTGACCCGGGT512GCAGCACCACCATTTAGGATAGGTGATATCCGAAATGCGATACCGAAACA
Dianthus caryophyllus mRNA, clone: CES29I21, 5' end sequence.
FY393243.1:410-429
AGAAACAATTCGGGTCAATTTGACCCGGGT410GCAGCACCACCATTTAGGATAGGTGATATCCGAAATGCGATACCGAAACA
TSA: Dianthus caryophyllus mRNA, contig: CAK09.344.C11.
FX297171.1:590-609
AGAAACAATTCGGGTCAATTTGACCCGGGT590GCAGCACCACCATTTAGGATAGGTGATATCCGAAATGCGATACCGAAACA
TSA: Dianthus superbus Ds_CL209Contig1 mRNA sequence.
JL383291.1:472-491
AGAAACAATTCGGGTCAATTTGACCCGGGT472GCAGCACCACCATTTAGGATAGGTGATATCCGAAATGCGATACCGAAACA
Electrona antarctica genome assembly, chromosome: 11.
OX578256.1:8094166-8094185
TTACAAAAAAAAACATATCTTATTTTATAA8094166ATCCTAAATGGTGGTGCTGCTGGGTCCATCATTGTTGAAGGTTCATGTTA
Protomyctophum bolini genome assembly, chromosome: 9.
OZ001274.1:38639937-38639956
CACCACTCAAAAATATATGTTATTTTATAA38639937ATCCTAAATGGTGGTGCTGCTGCAGGGTCCATCGTTGTTGAAGGTTCATG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCAGCACCACCATTTAGGAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGCACCACCATTTAGGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.399 | 0.390 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGCACCACCATTTAGGAT&k=0&no_gap=0&offset=0&limit=50
0.429 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=ATCCTAAATGGTGGTGCTGC&k=0&no_gap=0&offset=0&limit=44
0.431 | 0.001 | cgi_end;

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