GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-27 08:48:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 5 from patent US 6426447.
AR221759.1:94-113
CCACAAATGGCATTGAAGCTTAACCCTTTG94GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Sequence 5 from patent US 7053267.
AR884915.1:94-113
CCACAAATGGCATTGAAGCTTAACCCTTTG94GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Sequence 50843 from Patent WO2008034648.
FB831570.1:180-199
CCACAAATGGCATTGAAGCTTAACCCTTTG180GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAGTCTCTAC
Sequence 50975 from Patent WO2008034648.
FB831702.1:25-44
ATGGCATTGAAGCTTAACCCTTTG25GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Sequence 50979 from Patent WO2008034648.
FB831706.1:25-44
ATGGCATTGAAGCTTAACCCTTTG25GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Sequence 17 from patent US 7572926.
GP513256.1:94-113
CCACAAATGGCATTGAAGCTTAACCCTTTG94GCATCTCAGCCTTACAACTTCCCT
Sequence 19 from patent US 7572926.
GP513258.1:94-113
CCACAAATGGCATTGAAGCTTAACCCTTTG94GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Sequence 50843 from Patent EP2090662.
HB701629.1:180-199
CCACAAATGGCATTGAAGCTTAACCCTTTG180GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAGTCTCTAC
Sequence 50975 from Patent EP2090662.
HB701761.1:25-44
ATGGCATTGAAGCTTAACCCTTTG25GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Sequence 50979 from Patent EP2090662.
HB701765.1:25-44
ATGGCATTGAAGCTTAACCCTTTG25GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Sequence 195325 from Patent EP2090662.
HB846111.1:145-164
CCACAAATGGCATTGAAGCTTAACCCTTTG145GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Sequence 33 from patent US 5475099.
I16557.1:94-113
CCACAAATGGCATTGAAGCTTAACCCTTTG94GCATCTCAGCCTTACAACTTCCCT
Sequence 33 from patent US 5510255.
I19665.1:94-113
CCACAAATGGCATTGAAGCTTAACCCTTTG94GCATCTCAGCCTTACAACTTCCCT
Sequence 17 from patent US 5723595.
I90192.1:94-113
CCACAAATGGCATTGAAGCTTAACCCTTTG94GCATCTCAGCCTTACAACTTCCCT
Sequence 19 from patent US 5723595.
I90194.1:94-113
CCACAAATGGCATTGAAGCTTAACCCTTTG94GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
E0706 Chinese cabbage etiolated seedling library Brassica rapa subsp. pekinensis cDNA clone E0706, mRNA sequence.
BG543215.1:95-114
CCACAAATGGCATTGAAGCTTAACCCTTTG95GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAGTCTCTAC
E1178 Chinese cabbage etiolated seedling library Brassica rapa subsp. pekinensis cDNA clone E1178, mRNA sequence.
BG543624.1:68-87
CCACAAATGGCATTGAAGCTTAACTCTTTG68GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAGTCTCTAC
BN20.001H08F010914 BN20 Brassica napus cDNA clone BN20001H08, mRNA sequence.
CD816699.1:102-121
CCACAAATGGCATTGAAGCTTAACCCTTTG102GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN20.040G23F011025 BN20 Brassica napus cDNA clone BN20040G23, mRNA sequence.
CD817009.1:103-122
CCACAAATGGCATTGAAGCTTAACCCTTTG103GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN20.041L06F011127 BN20 Brassica napus cDNA clone BN20041L06, mRNA sequence.
CD817382.1:89-108
CCACAAATGGCATGGAAGCTTAACCCTTGG89GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.047D14F020109 BN25 Brassica napus cDNA clone BN25047D14, mRNA sequence.
CD822966.1:90-109
CCACAAATGGCATTGAAGCTTAACCCTTTG90GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.048F22F020110 BN25 Brassica napus cDNA clone BN25048F22, mRNA sequence.
CD823312.1:3-22
GG3GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.049H04F020111 BN25 Brassica napus cDNA clone BN25049H04, mRNA sequence.
CD823636.1:90-109
CAAATGGCATTGAAGCTTAACAACCCTTGG90GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.058C12F011029 BN25 Brassica napus cDNA clone BN25058C12, mRNA sequence.
CD824598.1:102-121
CCACAAATGGCATTGAAGCTTAACCCTTTG102GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.059B15F011129 BN25 Brassica napus cDNA clone BN25059B15, mRNA sequence.
CD824884.1:92-111
CCACAAATGGCATTGAAGCTTAACCCTTTG92GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.059H23F011129 BN25 Brassica napus cDNA clone BN25059H23, mRNA sequence.
CD825023.1:80-99
CAAATGGCATTGAAGCTTAACAACCCTTTG80GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.059J15F011129 BN25 Brassica napus cDNA clone BN25059J15, mRNA sequence.
CD825053.1:97-116
CCACAAATGGCATTGAAGCTTAACCCTTTG97GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAACCTCTAC
BN25.060H08F011129 BN25 Brassica napus cDNA clone BN25060H08, mRNA sequence.
CD825336.1:99-118
CCACAAATGGCATTGAAGCTTAACCCTTTG99GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.060N24F011129 BN25 Brassica napus cDNA clone BN25060N24, mRNA sequence.
CD825470.1:101-120
CCACAAATGGCATTGAAGCTTAACCCTTTG101GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.061E16F011129 BN25 Brassica napus cDNA clone BN25061E16, mRNA sequence.
CD825614.1:80-99
CAAATGGCATTGAAGCTTAACAACCCTTTG80GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.063E16F020118 BN25 Brassica napus cDNA clone BN25063E16, mRNA sequence.
CD826261.1:92-111
CCACAAATGGCATTGAAGCTTAACCCTTTG92GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.063G13F020117 BN25 Brassica napus cDNA clone BN25063G13, mRNA sequence.
CD826301.1:85-104
CAAATGGCATTGAAGCTTAACAACCCTTTG85GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.064L07F020417 BN25 Brassica napus cDNA clone BN25064L07, mRNA sequence.
CD826692.1:101-120
CCACAAATGGCATTGAAGCTTAACCCTTTG101GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.066L20F020123 BN25 Brassica napus cDNA clone BN25066L20, mRNA sequence.
CD827224.1:88-107
CAAATGGCATTGAAGCTTAACAACCCTTTG88GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.066O02F020122 BN25 Brassica napus cDNA clone BN25066O02, mRNA sequence.
CD827266.1:89-108
CAAATGGCATTGAAGCTTAACAACCCTTTG89GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.067A18F020123 BN25 Brassica napus cDNA clone BN25067A18, mRNA sequence.
CD827317.1:88-107
CAAATGGCATTGAAGCTTAACAACCCTTTG88GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.068G15F020124 BN25 Brassica napus cDNA clone BN25068G15, mRNA sequence.
CD827711.1:89-108
CAAATGGCATTGAAGCTTAACAACCCTTTG89GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.068P18F020125 BN25 Brassica napus cDNA clone BN25068P18, mRNA sequence.
CD827876.1:97-116
CCACAAATGGCATTGAAGCTTAACCCTTTG97GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAACCTCTAC
BN25.069G21F020124 BN25 Brassica napus cDNA clone BN25069G21, mRNA sequence.
CD828012.1:87-106
CAAATGGCATTGAAGCTTAACAACCCTTTG87GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.069N14F020124 BN25 Brassica napus cDNA clone BN25069N14, mRNA sequence.
CD828127.1:100-119
CCACAAATGGCATTGAAGCTTAACCCTTTG100GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.070A24F020125 BN25 Brassica napus cDNA clone BN25070A24, mRNA sequence.
CD828197.1:98-117
CCACAAATGGCATTGAAGCTTAACCCTTTG98GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.070H09F020125 BN25 Brassica napus cDNA clone BN25070H09, mRNA sequence.
CD828334.1:90-109
CCACAAATGGCATTGAAGCTTAACCCTTGG90GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.070I05F020125 BN25 Brassica napus cDNA clone BN25070I05, mRNA sequence.
CD828354.1:89-108
CAAATGGCATTGAAGCTTAACAACCCTTTG89GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.070M14F020125 BN25 Brassica napus cDNA clone BN25070M14, mRNA sequence.
CD828443.1:80-99
CAAATGGCATTGAAGCTTAACAACCCTTTG80GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.071A05F020325 BN25 Brassica napus cDNA clone BN25071A05, mRNA sequence.
CD828518.1:89-108
CAAATGGCATTGAAGCTTAACAACCCTTTG89GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN25.071L07F020326 BN25 Brassica napus cDNA clone BN25071L07, mRNA sequence.
CD828730.1:101-120
CCACAAATGGCATTGAAGCTTAACCCTTTG101GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.058B15F011019 BN40 Brassica napus cDNA clone BN40058B15, mRNA sequence.
CD831128.1:85-104
CAAATGGCATTGAAGCTTAACAACCCTTTG85GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.058F14F011019 BN40 Brassica napus cDNA clone BN40058F14, mRNA sequence.
CD831180.1:79-98
CAAATGGCATTGAAGCTTAACAACCCTTTG79GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.058P24F011019 BN40 Brassica napus cDNA clone BN40058P24, mRNA sequence.
CD831330.1:110-129
CAAATGGCATTGAAGCTTAACAACCCTTGG110GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.059B04F011208 BN40 Brassica napus cDNA clone BN40059B04, mRNA sequence.
CD831350.1:80-99
CAAATGGCATTGAAGCTTAACAACCCTTGG80GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.059L14F011208 BN40 Brassica napus cDNA clone BN40059L14, mRNA sequence.
CD831504.1:109-128
CAAATGGCATTGAAGCTTAACAACCCTTGG109GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.059O04F011208 BN40 Brassica napus cDNA clone BN40059O04, mRNA sequence.
CD831536.1:85-104
CAAATGGCATTGAAGCTTAACAACCCTTTG85GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.060J09F011227 BN40 Brassica napus cDNA clone BN40060J09, mRNA sequence.
CD831711.1:91-110
CAAATGGCATTGAAGCTTAACAACCCTTTG91GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.060O13F011226 BN40 Brassica napus cDNA clone BN40060O13, mRNA sequence.
CD831807.1:108-127
CAAATGGCATTGAAGCTTAACAACCCTTTG108GCATCTCAGCCTTACAACTTCCCTTCCTCGGCCCGTCCGCCAATCTCTAC
BN40.061G14F011228 BN40 Brassica napus cDNA clone BN40061G14, mRNA sequence.
CD831945.1:91-110
CAAATGGCATTGAAGCTTAACAACCCTTTG91GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.061O18F011228 BN40 Brassica napus cDNA clone BN40061O18, mRNA sequence.
CD832083.1:151-170
CAAATGGCATTGAAGCTTAACAACCCTTTG151GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.062D08F011227 BN40 Brassica napus cDNA clone BN40062D08, mRNA sequence.
CD832152.1:81-100
ANAATGGCATTGAAGCTTAACAACCCTTGG81GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.062G03F011227 BN40 Brassica napus cDNA clone BN40062G03, mRNA sequence.
CD832194.1:104-123
CCACAAATGGCATTGAAGCTTAACCCTTTG104GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.062H17F011227 BN40 Brassica napus cDNA clone BN40062H17, mRNA sequence.
CD832219.1:91-110
CAAATGGCATTGAAGCTTAACAACCCTTTG91GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.063I05F011228 BN40 Brassica napus cDNA clone BN40063I05, mRNA sequence.
CD832488.1:83-102
CAAATGGCATTGAAGCTTAACAACCCTTTG83GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.064D08F011227 BN40 Brassica napus cDNA clone BN40064D08, mRNA sequence.
CD832675.1:91-110
CAAATGGCATTGAAGCTTAACAACCCTTGG91GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.064F02F011227 BN40 Brassica napus cDNA clone BN40064F02, mRNA sequence.
CD832706.1:91-110
CAAATGGCATTGAAGCTTAACAACCCTTGG91GCATCTCAGCCTTACAACTTCCCCTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.064P02F011227 BN40 Brassica napus cDNA clone BN40064P02, mRNA sequence.
CD832864.1:82-101
CAAATGGCATTGAAGCTTAACAACCCTTGG82GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.067A01F011228 BN40 Brassica napus cDNA clone BN40067A01, mRNA sequence.
CD833373.1:103-122
CCACAAATGGCATTGAAGCTTAACCCTTTG103GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BN40.067A21F011228 BN40 Brassica napus cDNA clone BN40067A21, mRNA sequence.
CD833387.1:101-120
CACANAATGGCATTGATGCTTAACCCTTTG101GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_26018.
FX733062.1:68-87
CCACAAATGGCATTGAAGCTTAACCCTTTG68GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAGTCTCTAC
BOMLB72TF BO_2_3_KB Brassica oleracea genomic clone BOMLB72, genomic survey sequence.
BH709689.1:390-409
ATTATGGCATTGAAGCTTAACAACCCTTTG390GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
BOT01-81M17TF BOT01 Brassica oleracea genomic clone BOT01-81M17, genomic survey sequence.
FI723245.1:19-38
AAGCTTAACAACCCTTTG19GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Brassica juncea Pusa Jaikisan plastidic delta-9-stearoyl-acyl-acyl carrier protein desaturase (fab2) gene, complete cds; nuclear gene for plastid product.
AF153420.1:25-44
ATGGCATTGAAGCTTAACCCTTTG25GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:11113265-11113284
CCACAAATGGCATTGAAGCTTAACCCTTTG11113265GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAGTCTCTAC
Brassica napus genome assembly, chromosome: A03.
HG994357.1:11032339-11032358
CCACAAATGGCATTGAAGCTTAACCCTTTG11032339GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Brassica napus genome assembly, chromosome: C03.
HG994367.1:15780046-15780065
CAAATGGCATTGAAGCTTAACAACCCTTTG15780046GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Brassica rapa genome, scaffold: A03.
LR031572.1:10888045-10888064
CCACAAATGGCATTGAAGCTTAACCCTTTG10888045GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Brassica oleracea HDEM genome, scaffold: C3.
LR031872.1:15773432-15773451
ATTATGGCATTGAAGCTTAACAACCCTTTG15773432GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Raphanus sativus genome assembly, chromosome: 6.
LR778315.1:14094380-14094399
GATATTATGGCATTGAAGCTTAACCCTTTG14094380GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:11012513-11012532
CCACAAATGGCATTGAAGCTTAACCCTTTG11012513GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
B.rapa cv.R500 mRNA for stearoyl-acyl carrier protein desaturase.
X60978.1:94-113
CCACAAATGGCATTGAAGCTTAACCCTTTG94GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC
B.napus mRNA for acyl-[acyl-carrier protein] desaturase.
X97325.1:28-47
CAAATGGCATTGAAGCTTAACCCTTTG28GCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTAC

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