GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-01-07 11:48:58, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Papaver somniferum cultivar Roxanne chromosome 3.
CP048215.1:107568341-107568360
GTCTACGAAATGTTAGTAGCAGAATGTCAT107568341GCCAATATCTCCAGTTTCATTTGATGTAACACGACCAAAATAAATTTCGG
Brassica rapa genome, scaffold: A07.
LR031574.1:18510945-18510964
AACGGAGTACAAGCCTATCCTTCCCGTTGC18510945GCCAATATCTCCAGTTTCATGCAAAATCTACTTTGTATACACAATACAAA
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:18802340-18802359
AACGGAGTACAAGCCTATCCTTCCCGTTGC18802340GCCAATATCTCCAGTTTCATGCAAAATCTACTTTGTATACACAATACAAA
Erebia gorge genome assembly, chromosome: 2.
OZ195580.1:23696864-23696883
CAATGTAACCTAATGTAATTATTACAAACG23696864ATGAAACTGGAGATATTGGCTTTAAATAAAGTATCGGGTAGACAATAACC
Cairina moschata breed yongchun chromosome 3.
CP130356.1:90225343-90225362
AGTATAAAGTATGTGTAAAACACTGGCATC90225343ATGAAACTGGAGATATTGGCATTTTTTCCACACTAACTTGACTGTATGCA
Cairina moschata breed yongchun chromosome 3.
CP130417.1:92042507-92042526
AGTATAAAGTATGTGTAAAACACTGGCATC92042507ATGAAACTGGAGATATTGGCATTTTTTCCACACTAACTTGACTGTATGCA
Apteryx australis mantelli genome assembly, scaffold: scaffold174.
LK064744.1:72232-72251
AATGAAGGCAATCACCTGAAAAGCTATAAA72232ATGAAACTGGAGATATTGGCAAAGCAGGGGACATAAAGCTTGACTAGAAA
Somateria mollissima genome assembly, chromosome: 3.
OX598304.1:92628313-92628332
TAAAGTATGTGTAAAACACTCACTGGCATC92628313ATGAAACTGGAGATATTGGCATTTTTTCCACACTAACTTGATTGTATGCA
Somateria mollissima genome assembly, chromosome: 3.
OX598692.1:92738478-92738497
TAAAGTATGTGTAAAACACTCACTGGCATC92738478ATGAAACTGGAGATATTGGCATTTTTTCCACACTAACTTGATTGTATGCA
Netta rufina genome assembly, chromosome: 3.
OZ037792.1:40501117-40501136
TATAAAGTATGTGTAAAATACACTGGCATC40501117ATGAAACTGGAGATATTGGCATTTTTTCCACACTAACTTGATTGTATGCA
Aythya ferina genome assembly, chromosome: 3.
OZ124216.1:38899647-38899666
AGTATAAAGTATGTGTAAAACACTGGCATC38899647ATGAAACTGGAGATATTGGCATTTTTTCCACACTAACTTGATTGTATGCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCAATATCTCCAGTTTCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCAATATCTCCAGTTTCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.270 | 0.260 | search_plus_done; http://172.18.8.135:50800/match?q=GCCAATATCTCCAGTTTCAT&k=0&no_gap=0&offset=0&limit=50
0.400 | 0.130 | search_minus_done; http://172.18.8.135:50800/match?q=ATGAAACTGGAGATATTGGC&k=0&no_gap=0&offset=0&limit=47
0.406 | 0.006 | cgi_end;

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