GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 05:28:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:44012301-44012320
GATTTGTTGGTTATCCTATTTTTTCTATAA44012301GCCACCTTTATTCTCATGGAAAATCAAATAATTAAAGAAAAAAATTTAAA
Vespertilio murinus genome assembly, chromosome: 4.
OZ004707.1:126969126-126969145
TCTCACAGCAAGGTGACCTGACATGATTAA126969126TCCATGAGAATAAAGGTGGCCCTTTGGCGGTCCATGGCGCTTTCTCTAAG
Anas platyrhynchos genome assembly, chromosome: 2.
LS423612.1:77030589-77030608
TCAAACACCTCTCCTCGCAAGGTATCTTGC77030589TCCATGAGAATAAAGGTGGCAGAACTGGGCCTTCATGATTTATCCACCCT
Somateria mollissima genome assembly, chromosome: 2.
OX598303.1:78711586-78711605
TCAAACACCTCTCCTCGCAAGGTATCTTGC78711586TCCATGAGAATAAAGGTGGCAGAACTGGGCCTTCATGATTTATCCACCCT
Somateria mollissima genome assembly, chromosome: 2.
OX598691.1:78602602-78602621
TCAAACACCTCTCCTCGCAAGGTATCTTGC78602602TCCATGAGAATAAAGGTGGCAGAACTGGGCCTTCATGATTTATCCACCCT
Anas acuta genome assembly, chromosome: 2.
OZ009963.1:78790711-78790730
TCAAACACCTCTCCTCGCAAGGTATCTTGC78790711TCCATGAGAATAAAGGTGGCAGAACTGGGCCTTCATGATTTATCCACCCC
Lotus japonicus genomic DNA, chromosome 5, clone: LjB08F01, BM1728.
AP010283.1:56307-56326
TTTAAATTTTTTTCTTTAATTATTTGATTT56307TCCATGAGAATAAAGGTGGCTTATAGAAAAAATAGGATAACCAACAAATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCACCTTTATTCTCATGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCACCTTTATTCTCATGGA | format : html | download : | debug : 

0.010 | 0.010 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=GCCACCTTTATTCTCATGGA&k=0&no_gap=0&offset=0&limit=50
0.134 | 0.035 | search_minus_done; http://172.18.8.135:50400/match?q=TCCATGAGAATAAAGGTGGC&k=0&no_gap=0&offset=0&limit=49
0.139 | 0.004 | cgi_end;

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