GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 03:01:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Eptesicus nilssonii genome assembly, chromosome: 9.
OX621288.1:93784004-93784023
GCCCCACGCTCCCTAAGCCATAAGGGCTGG93784004GCCCTTGTCACGCTAAACTCGGGGCCCAAACGCCCGGGTTGTCCTGGCCC
Danio rerio short stature homeobox, mRNA (cDNA clone MGC:123182 IMAGE:7253350), complete cds.
BC107618.1:351-370
CACGTAGAGCTGGAAAAGGAGAAATTAAAG351GAGTTTAGCGTGACAAGGGCTTCTGACGGAATTTATGACTGCAAAGACAA
Zebrafish DNA sequence from clone CH211-134K13 in linkage group 9.
BX294669.8:134098-134117
CACGTAGAGCTGGAAAAGGAGAAATTAAAG134098GAGTTTAGCGTGACAAGGGCTTCTGACGGTGAGTTTCTTCTGCACGCTGT
Danio rerio strain T5D chromosome 9.
CP068743.1:34783106-34783125
CACGTAGAGCTGGAAAAGGAGAAATTAAAG34783106GAGTTTAGCGTGACAAGGGCTTCTGACGGTGAGTTTCTTCTGCACGCTGT
Danio rerio strain Tubingen chromosome 9.
CP137046.2:36454123-36454142
CACGTAGAGCTGGAAAAGGAGAAATTAAAG36454123GAGTTTAGCGTGACAAGGGCTTCTGACGGTGAGTTTCTTCTGCACGCTGT
Danio rerio genome assembly, chromosome: 9.
LR812046.1:34679105-34679124
CACGTAGAGCTGGAAAAGGAGAAATTAAAG34679105GAGTTTAGCGTGACAAGGGCTTCTGACGGTGAGTTTCTTCTGCACGCTGT
Danio rerio genome assembly, chromosome: 9.
LR812071.1:34838858-34838877
CACGTAGAGCTGGAAAAGGAGAAATTAAAG34838858GAGTTTAGCGTGACAAGGGCTTCTGACGGTGAGTTTCTTCTGCACGCTGT
Danio rerio strain Cooch Behar (CB) genome assembly, chromosome: 9.
LR812552.1:34408205-34408224
CACGTAGAGCTGGAAAAGGAGAAATTAAAG34408205GAGTTTAGCGTGACAAGGGCTTCTGACGGTGAGTTTCTTCTGCACGCTGT
Danio rerio strain Nadia (NA) genome assembly, chromosome: 9.
LR812577.1:35350204-35350223
CACGTAGAGCTGGAAAAGGAGAAATTAAAG35350204GAGTTTAGCGTGACAAGGGCTTCTGACGGTGAGTTTCTTCTGCACGCTGT
Danio rerio genome assembly, chromosome: 9.
LR812602.1:34879740-34879759
CACGTAGAGCTGGAAAAGGAGAAATTAAAG34879740GAGTTTAGCGTGACAAGGGCTTCTGACGGTGAGTTTCTTCTGCACGCTGT
Danio rerio genome assembly, chromosome: 9.
OX063298.1:35044032-35044051
CACGTAGAGCTGGAAAAGGAGAAATTAAAG35044032GAGTTTAGCGTGACAAGGGCTTCTGACGGTGAGTTTCTTCTGCACGCTGT
AGENCOURT_21608302 NIH_ZGC_19 Danio rerio cDNA clone IMAGE:7253350 5', mRNA sequence.
CN319777.1:353-372
CACGTAGAGCTGGAAAAGGAGAAATTAAAG353GAGTTTAGCGTGACAAGGGCTTCTGACGGAATTTATGACTGCAAAGACAA
AGENCOURT_55708002 NIH_ZGC_22 Danio rerio cDNA clone IMAGE:7923388 5', mRNA sequence.
DT318065.1:348-367
CACGTAGAGCTGGAAAAGGAGAAATTAAAG348GAGTTTAGCGTGACAAGGGCTTCTGACGGAATTTATGACTGCAAAGACAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCCTTGTCACGCTAAACTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCCTTGTCACGCTAAACTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=GCCCTTGTCACGCTAAACTC&k=0&no_gap=0&offset=0&limit=50
0.195 | 0.100 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTTTAGCGTGACAAGGGC&k=0&no_gap=0&offset=0&limit=49
0.203 | 0.008 | cgi_end;

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