GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 11:27:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mus musculus molossinus genome assembly, chromosome: 9.
OW971668.1:34903391-34903409
AAAGTACTACTTTATAAAGAGTCAGCTCTT34903391GCCTAAAAAATGGGCTACACAGTTCTGGGCCTCTGGGTCTCCCACTCAC
Mus musculus musculus genome assembly, chromosome: 9.
OW971772.1:34837166-34837184
AAAGTACTACTTTATAAAGAGTCAGCTCTT34837166GCCTAAAAAATGGGCTACACAGTTCTGGGCCTCTGGGTCTCCCACTCAC
Osmerus eperlanus genome assembly, chromosome: 12.
OY830025.1:6001644-6001662
CCACGTGCTGTGCGCCTGTTTGGGGGGAAC6001644GCCTAAAAAATGGGCTACATCTGGCAGCTAAACAAGAGACAGAGAGACA
1112870049455 BABEVCEREB-C-01-1-7KB Papio anubis cDNA clone 1061056071407 5', mRNA sequence.
GE865129.1:259-277
CTATAAAATACCACAGTGAAATTGCAATAA259GCCTAAAAAATGGGCTACAAATCCCAGCTATGCTCAAGCAAGCAGTGAA
Crataegus laevigata genome assembly, chromosome: 15.
OY756952.1:10377543-10377561
CTGAAAGAAAAAAAATGTTGTGTGTCCCAA10377543GCCTAAAAAATGGGCTACATTGTGCAACCAAAAAAAAATCATTTTTTTT
Rhaphigaster nebulosa genome assembly, chromosome: X.
OX411307.1:149378620-149378638
GGCATACAACTTATTTCAAACATACTGAAG149378620GCCTAAAAAATGGGCTACATCACTTGTTTTAAACCAATATGTGATTCTT
Orthosia gothica genome assembly, chromosome: 7.
OX459041.1:15662591-15662609
CCAATCAAGCGTTCTTAAAATAAATAAATT15662591GCCTAAAAAATGGGCTACAACACTATTTCTTCAATAAAATAAAACCTGA
Panzeria rudis genome assembly, chromosome: 2.
OY101448.1:4151733-4151751
GTTTTTGAAATTAAAAGCGTTTTTTTCGAA4151733GCCTAAAAAATGGGCTACAATCATGTCTCTTCATCTTATTGCGCCATCC
Drosophila histrio genome assembly, chromosome: 2.
OY282581.2:27578779-27578797
CATACAACATATTGTTTACATATGTGCGCT27578779GCCTAAAAAATGGGCTACACTTTTTTTTTTTCTTCTGTTATTCATTATT
Meiosimyza platycephala genome assembly, chromosome: 2.
OY759209.1:79541746-79541764
AGTCGTTTTATATTTTATTAAAAGTGCAGG79541746GCCTAAAAAATGGGCTACAGTTTCGTCCGTTGCTAGATGAACTCATCAT
Tipula lateralis genome assembly, chromosome: 3.
OZ010738.1:133251177-133251195
ATAATAATTTTAATGGGAAAAATTCAAACC133251177GCCTAAAAAATGGGCTACAGTAGATGGAGAAGAACTGTTAGCTTGCTTA
Trididemnum clinides genome assembly, chromosome: 1.
OY776284.1:58040431-58040449
AAACAATCTTTCAGTTACTTCAATATCTGG58040431TGTAGCCCATTTTTTAGGCCAGATCGCTTCTGTCTGCTTTATCTCATTA
Drosophila limbata genome assembly, chromosome: 1.
OZ001352.1:25708613-25708631
TGGCATGTTAGTTATAATGAATAGAAAAAA25708613TGTAGCCCATTTTTTAGGCAACGCATATGTAAACAATATGTTGTATGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCTAAAAAATGGGCTACA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCTAAAAAATGGGCTACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.202 | 0.194 | search_plus_done; http://172.18.8.135:50400/match?q=GCCTAAAAAATGGGCTACA&k=0&no_gap=0&offset=0&limit=50
0.225 | 0.023 | search_minus_done; http://172.18.8.135:50400/match?q=TGTAGCCCATTTTTTAGGC&k=0&no_gap=0&offset=0&limit=39
0.226 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).