GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 14:49:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143382.1:8126186-8126206
AACTGTGCGGCATCACATTCACATGACCGC8126186GCTGCTTGCTGCAGATCAAGTGCATGCATATACATATACATATACATATAC
Crataegus laevigata genome assembly, chromosome: 3.
OY756940.1:22754036-22754056
GTAGAATATTTCATATGAATATATGCATGC22754036ACTTGATCTGCAGCAAGCAGCACGGACATGTGAATGTGATGCCGCACAGTT
Pyrus communis genome assembly, chromosome: 15.
OY757082.1:6880780-6880800
TCATAGAATATTTCATATATATATCTATGC6880780ACTTGATCTGCAGCAAGCAGCGCGGACATGTGAATGTGATGCCGCACAGTT
Corticium candelabrum genome assembly, chromosome: 6.
OY729832.1:4062886-4062906
TCTTACGCCTTTCATCTCTAAGCCACCGTG4062886ACTTGATCTGCAGCAAGCAGCCGTACCTACACGTATGCACATTCGGTAGGT
Corticium candelabrum genome assembly, chromosome: 6.
OY729832.1:4438819-4438839
TCTTACGCATTTCATCTCTAAGCCACCGTG4438819ACTTGATCTGCAGCAAGCAGCCGTACCTACACGTATGCACATTCAGTAGGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTGCTTGCTGCAGATCAAGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGCTTGCTGCAGATCAAGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.092 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGCTTGCTGCAGATCAAGT&k=0&no_gap=0&offset=0&limit=50
0.107 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=ACTTGATCTGCAGCAAGCAGC&k=0&no_gap=0&offset=0&limit=49
0.110 | 0.003 | cgi_end;

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