GGGenome | Results

Help | Japanese

2025-04-17 08:10:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Pm_2736 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW871310.1:185-204

GCCGCCAGGCAACGCAGCCAAGCTTGCCGC185GGAAAAAGATGACGAAACAGTTAACGGGAAAGCGCGATGATACGCCTTTG

TSA: Sesamum indicum cultivar Zhongzhi 11 Unigene24976 mRNA sequence.
JL346679.1:395-414

CACCAGCAGGGCAACCGCCCACCGCCGCCC395GGAAAAAGATGACGAAACAGCTGACCGGGAAACGGGAAGATACGCCGCTG

TSA: Betula platyphylla Unigene7863_ya_RNA mRNA sequence.
JP675935.1:226-245

AGCCAGAGGCAGGGCAGCCAAGCGTGCCGC226GGAAAAAGATGACGAAACAGTTAACCGGAAAACGCGACGATACGCT

LuSp094B15_1061063885183_TV POTATO-B-01-100-110KB Solanum phureja genomic clone LuSp094B15, genomic survey sequence.
GS324634.1:151-170

GATTATACAGCTAAAAAGGGACAAATTAAA151GGAAAAAGATGACGAAACAGAAAAAGTTTCCGGCGAGAGTGAAGAGGAAG

Prunus dulcis DNA, pseudomolecule Pd06.
AP019302.1:5833980-5833999

AGCCGCAGGCAGCGCAGCCAAGCTTGCCGC5833980GGAAAAAGATGACGAAACAGTTAACGGGAAAGCGCGATGATACGCCTTTG

Solanum tuberosum cultivar P8 chromosome 1.
CP046688.1:83708392-83708411

GATTATACAGCTAAAAAGGNACAAATTAAA83708392GGAAAAAGATGACGAAACAGAAAAAGTTTCCGGCGAGAGTGAAGAGGAAG

Solanum tuberosum cultivar MSH/14-112 chromosome 1.
CP046702.1:83709157-83709176

GATTATACAGCTAAAAAGGSACAAATTAAA83709157GGAAAAAGATGACGAAACAGAAAAAGTTTCCGGCGAGAGTGAAGAGGAAG

Solanum pinnatisectum cultivar CGN17745 chromosome 1.
CP047567.1:83680496-83680515

GATTATACAGCTAAAAAGGCACAAATTAAA83680496GGAAAAAGATGACGAAACAGAAAAAGTTTCCGGCGAGAGTGAAGAGGAAG

Carpinus viminea chromosome 2.
CP054668.1:5760260-5760279

AGCCCCAGGCAGGGCAGCCAAGCGCGCCGA5760260GGAAAAAGATGACGAAACAGTTAACTGGCAAACGCGAGGATACGATCTTG

Carpinus viminea chromosome 4.
CP054670.1:1381856-1381875

AGCCCCTGGCAGGGCAGCCAAGCGCGCCGA1381856GGAAAAAGATGACGAAACAGTTAATTGGCAAACGCGAGGATACGATTTCG

Solanum tuberosum cultivar Solyntus chromosome 1.
CP055234.1:54740045-54740064

GATTATACAGCTAAAAAGGGACAAATTAAA54740045GGAAAAAGATGACGAAACAGAAAAAGTTTCCGGCGAGAGTGAAGAGGAAG

Solanum verrucosum cultivar 11H23 chromosome 1.
CP133612.1:79762317-79762336

GATTATACAGCTAAAAAGGGGCAAATTAAA79762317GGAAAAAGATGACGAAACAGAAAAAGTTTCCGGCGAGAGTGAAGAGGAAG

Ziziphus jujuba cultivar Dongzao chromosome 10.
CP134460.1:10589008-10589027

CAGCTCAGCCGCAGACGCCAACCGCTCCTC10589008GGAAAAAGATGACGAAACAGCTGACCGGAAAACGTGATGATACTCCTCTG

Khaya senegalensis isolate HCNGB_00002341 chromosome 18.
CP135540.1:5679126-5679145

TGATGGAAACTCCTTCGGGGCAGCAAAGCT5679126GGAAAAAGATGACGAAACAGTTCACAGCAAAACGGGATGATACACCGCTG

Prunus mume strain xianmimei clone P23 SSR marker genomic sequence.
GU458024.1:170-189

AGCCGCAGGCAACGCAGCCAAGCTTGCCGC170GGAAAAAGATGACGAAACAG

Fagus sylvatica genome assembly, chromosome: 9.
OU015769.1:3657388-3657407

AACCACAAGCAGGGCAGCCAAGCCTGCCCC3657388GGAAAAAGATGACGAAACAGTTAACCGGAAAACGCGATGATACGCCTTTG

Euphrasia confusa genome assembly, chromosome: 2.
OX940950.1:17957321-17957340

CCTCGTCCGGGCACACTTCCATCACGCCCA17957321GGAAAAAGATGACGAAACAGCAGACCGGAAAAAGGGACGACACGGCCTTG

Geranium rotundifolium genome assembly, chromosome: 7.
OY987317.1:27082401-27082420

AACCTGAGCGGCCACAGCAGCCTACGCCCC27082401GGAAAAAGATGACGAAACAGCTTACTGGGAAAAGGGATGATACTCGACTC

Myrica gale genome assembly, chromosome: 21.
OZ005618.1:9299934-9299953

AGCCCCAAGAAGGGGAACCAAGCGCTCCTC9299934GGAAAAAGATGACGAAACAGTTAACTGGAAAACGCGAGGATACGCTCTTG

Blautia argi strain KCTC 15426 chromosome, complete genome.
CP030280.1:738036-738055

CACTGAAGAGGAAGTTATTTCCCTGATTCG738036GGAAAAAGATGACGAAACAGAGCTGATACTAACTGGAAATGTGGTATCAG

Dasysyrphus albostriatus genome assembly, chromosome: 3.
OX276337.1:27617043-27617062

GGACAAGGTTGTCCAAAAAAATGTGTCCCA27617043GGAAAAAGATGACGAAACAGTTGAGCCTAAATATGAAAGGAACGAACGTT

JP 2017537871-A/6: COMPOSITIONS COMPRISING BACTERIAL STRAINS.
MA014432.1:2456484-2456503

ATTTATATTACACATTTCATTTTTATAGTA2456484CTGTTTCGTCATCTTTTTCCCAAAATAGAAATACTACAACATGGAATAAT

JP 2018203742-A/6: COMPOSITIONS COMPRISING BACTERIAL STRAINS.
MC415420.1:2456484-2456503

ATTTATATTACACATTTCATTTTTATAGTA2456484CTGTTTCGTCATCTTTTTCCCAAAATAGAAATACTACAACATGGAATAAT

Sequence 6 from patent US 10058574.
MI964980.1:2456484-2456503

ATTTATATTACACATTTCATTTTTATAGTA2456484CTGTTTCGTCATCTTTTTCCCAAAATAGAAATACTACAACATGGAATAAT

Sequence 6 from patent US 10391130.
MO332187.1:2456484-2456503

ATTTATATTACACATTTCATTTTTATAGTA2456484CTGTTTCGTCATCTTTTTCCCAAAATAGAAATACTACAACATGGAATAAT

Sequence 6 from patent US 10780134.
MV715671.1:2456484-2456503

ATTTATATTACACATTTCATTTTTATAGTA2456484CTGTTTCGTCATCTTTTTCCCAAAATAGAAATACTACAACATGGAATAAT

Sequence 6 from patent US 11040075.
MY058766.1:2456484-2456503

ATTTATATTACACATTTCATTTTTATAGTA2456484CTGTTTCGTCATCTTTTTCCCAAAATAGAAATACTACAACATGGAATAAT

Blautia argi isolate Blautia argi canine HQ MAG genome assembly, chromosome: 1.
LR994468.1:2246449-2246468

CTGATACCACATTTCCAGTTAGTATCAGCT2246449CTGTTTCGTCATCTTTTTCCCGAATCAGGGAAATAACTTCCTCTTCAGTG

TSA: Sesamum indicum cultivar Zhongzhi 11 Unigene62309 mRNA sequence.
JL349003.1:1265-1284

CAGCGGCGTATCTTCCCGTTTCCCGGTCAG1265CTGTTTCGTCATCTTTTTCCGGGCGGCGGTGGGCGGTTGCCCTGCTGGTG

TSA: Sesamum indicum Locus_26044_Transcript_1/2_Confidence_1.000_Length_2624 mRNA sequence.
JP656157.1:1774-1793

CAGCGGCGTATCTTCCCGTTTCCCGGTCAG1774CTGTTTCGTCATCTTTTTCCGGGCGGCGGTGGGCGGTTGCCCTGCTGGTG

MG_Bb0077N14.F MG_Bb Erythranthe guttata genomic 5', genomic survey sequence.
GS448392.1:518-537

CATTGTCCGATTTCGGAGACATGGATACAC518CTGTTTCGTCATCTTTTTCCCCATCGGAATGGTAAATTGCAAGGGTCAAA

MG_Bb0027D15.F MG_Bb Erythranthe guttata genomic 5', genomic survey sequence.
GS462006.1:555-574

CACTGTCCGATTTTGGAGACATGGATACAC555CTGTTTCGTCATCTTTTTCCCCATCGGAATGGTAATTTGTAAGGGTCAAA

Gossypium raimondii isolate D5-4 chromosome D5_08.
CP032560.1:219691-219710

TAGGTTCGTATCATCACGTTTCCCAGTTAA219691CTGTTTCGTCATCTTTTTCCTACGAGCAGGAACAGATGGCTGCTCGGTTG

Corylus americana cultivar Rush chromosome 10.
CP125823.1:18031821-18031840

CAAGATCGTATCTTCGCGTTTGCCAGTTAA18031821CTGTTTCGTCATCTTTTTCCTCGGCGCGCTTGGCTGCCCTGCCTGTGGCT

Corylus americana cultivar Winkler chromosome 10.
CP125834.1:17979770-17979789

CAAGATCGTATCTTCGCGTTTGCCAGTTAA17979770CTGTTTCGTCATCTTTTTCCTCGGCGCGCTTGGCTGCCCTGCCTGTGGCT

Swietenia macrophylla isolate HCNGB_00002344 chromosome 25.
CP135576.1:1824040-1824059

CAACGGCGTGTCATCCCGTTTTGCTGTGAA1824040CTGTTTCGTCATCTTTTTCCAGCTTTGCTGCCCCGAAGGAGTTTCCATCA

Prunus mume strain taoxingmei clone P24 SSR marker genomic sequence.
GU458025.1:1-20

1CTGTTTCGTCATCTTTTTCCGCGGCAAGCTTGGCTGCGTTGCCTGCGGCT

Corylus avellana genome assembly, chromosome: ca10.
LR899432.1:17244690-17244709

CAAGATCGTATCTTCGCGTTTGCCAGTTAA17244690CTGTTTCGTCATCTTTTTCCTCGGCGCGCTTGGCTGCCCTGCCTGTGGCT

Euphrasia confusa genome assembly, chromosome: 16.
OX940964.1:729170-729189

CAAAGCCGTGTCGTCCCTTTTTCCGGTCAG729170CTGTTTCGTCATCTTTTTCCGAGGCGTGATGGGAGTGTGTCCGGACAAGG

Ajuga chamaepitys genome assembly, chromosome: 13.
OY282507.1:13563290-13563309

CAGCGCCGAGTCCTCCCGTTTTCCAGTCAG13563290CTGTTTCGTCATCTTTTTCCGGGGAGTCGAAGGAGTCTGGCTGGACGATG

Alnus glutinosa genome assembly, chromosome: 9.
OY340906.1:21664220-21664239

CAAGATCGTATCCTCGCGTTTTCCGGTTAA21664220CTGTTTCGTCATCTTTTTCCGCGGCACGCTTGGCTGCCCTGCCTGTGGCT

Myrica gale genome assembly, chromosome: 5.
OZ005602.1:20073050-20073069

CAAGAGCGTATCCTCGCGTTTTCCAGTTAA20073050CTGTTTCGTCATCTTTTTCCGAGGGGCGCTTGGTTCCCCTGCTTGGGGCT

Lucinisca nassula genome assembly, chromosome: 12.
OY757021.1:122704336-122704355

GTAAACTTAACACAATTCCTTATATTTTTT122704336CTGTTTCGTCATCTTTTTCCAAAAATACGTATCTAATCACTGCTCTGTAC

Sepia lycidas genome assembly, chromosome: 13.
OZ010583.1:60407383-60407402

TTACTTCTTCTTGCTCTGACGCTTATTCAT60407383CTGTTTCGTCATCTTTTTCCTCATTTTGACGCTTCTTCTTCTTCGTCATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAAAAAGATGACGAAACAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAAAAAGATGACGAAACAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.238 | 0.230 | search_plus_done; http://172.18.8.135:50400/match?q=GGAAAAAGATGACGAAACAG&k=0&no_gap=0&offset=0&limit=50
0.713 | 0.475 | search_minus_done; http://172.18.8.135:50400/match?q=CTGTTTCGTCATCTTTTTCC&k=0&no_gap=0&offset=0&limit=29
0.728 | 0.015 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).