GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:33:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Aegilops sharonensis genome assembly, chromosome: 7S.
LR880972.1:818129276-818129294
GACCGTCCTGATTTTATGGGAGATTTGGCA818129276GGAAAGAATCGGTGCACCTTCAGAGGTAAGATTGCTTCTGCAAATGAGA
Aegilops longissima genome assembly, chromosome: 7S.
LR881075.1:771198222-771198240
GACCGTCCTGATTTTATGGGAGATTTGGCA771198222GGAAAGAATCGGTGCACCTTCAGAGGTAAGATTGCTTCTGCAAATGAGA
Ectemnius lituratus genome assembly, chromosome: 2.
OU343034.1:20545524-20545542
TTAAAAGCATTTAAAAGTCAGATGTCTTGA20545524GGAAAGAATCGGTGCACCTTCTTAAATCGATGCCCTAATCTTCGCGAGT
Solanum melongena mRNA, clone: CHX03I10, 5'end, expressed in ovary at 24h after anthesis.
FS013059.1:133-151
CAAGTGCAAGCTCTGTTCCAAACACAAAGG133AGGTGCACCGATTCTTTCCTCCTGGAAAAATAATGCATATAGTTACTCT
Secale cereale genome assembly, chromosome: 4R.
LR738712.1:766818011-766818029
TCTCATTTGCAGAAGCAATCTTACCTCTGA766818011AGGTGCACCGATTCTTTCCTCCTGCCAAATCTCCCGTCAAATCAGGATG
Aegilops longissima genome assembly, chromosome: 7S.
LR881075.1:582122503-582122521
TCTCATTTGCAGAAGCAATCTTACCTCTGA582122503AGGTGCACCGATTCTTTCCTGCCAAATCTCCCATAAAATCAGGACGGTC
Bacillus sp. KH172YL63 DNA, complete genome.
AP022842.1:1085938-1085956
CCTTGGATTATTCGTATTGTTAGTCGGTGT1085938AGGTGCACCGATTCTTTCCGGTGGAAGAGGAGGGTTTCCGATCCTGATC
Ectemnius continuus genome assembly, chromosome: 1.
OU342856.1:15873106-15873124
ACTGGCGAAGATTAGGGCATCGATTTAAGA15873106AGGTGCACCGATTCTTTCCTCAAGACATCTGACTTTTAAATGCTTTTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAAAGAATCGGTGCACCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAAAGAATCGGTGCACCT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.107 | 0.099 | search_plus_done; http://172.18.8.135:50400/match?q=GGAAAGAATCGGTGCACCT&k=0&no_gap=0&offset=0&limit=50
0.213 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=AGGTGCACCGATTCTTTCC&k=0&no_gap=0&offset=0&limit=47
0.216 | 0.003 | cgi_end;

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