GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 18:35:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:31984980-31985000
CTTGTGAGGGTGAGAAGATGGTTAGAAAGA31984980GGAAAGTGAAAATGAGAAGGGAGGAAGAAGAAGAAGAAGAAGAAGCCATGG
Thysanoteuthis rhombus genome assembly, chromosome: 10.
OY735207.1:16835616-16835636
AAATTGTCAAAGTTCAAATCAATTTTGTAC16835616GGAAAGTGAAAATGAGAAGGGTTTCGTGAGTGTATATGTAATTGAACACAT
Rhinatrema bivittatum genome assembly, chromosome: 13.
LR584399.1:39739237-39739257
CCCTTCCCACTTACATCCTCTTTCTTCCAT39739237CCCTTCTCATTTTCACTTTCCTTCCCCTCCCACCTCCTCAACCCCTTCCTT
Trifolium repens mRNA, clone: WCC16n18_088, unspecified EST.
FY459851.1:29-49
TCTTTCTCCATGGCTTCTTCTTCTTCCT29CCCTTCTCATTTTCACTTTCCTCTTCCTCACCATCTTCTCACCCTCACAAG
Trifolium repens mRNA, clone: WCC22c18_089, unspecified EST.
FY461718.1:28-48
TGGCTTCTTCTTCTTCTTCTTCTTCCT28CCCTTCTCATTTTCACTTTCCTCTTCCTCACCATCTTCTCACCCTCACAAG
Trifolium repens mRNA, clone: WCC24e10_051, unspecified EST.
FY462468.1:29-49
TCTTTCTCCATGGCTTCTTCTTCTTCCT29CCCTTCTCATTTTCACTTTCCTCTTCCTCACCATCTTCTCACCCTCACAAG
Trifolium repens mRNA, clone: WCC25n16_056, unspecified EST.
FY463047.1:23-43
ATGGCTTCTTCTTCTTCTTCCT23CCCTTCTCATTTTCACTTTCCTCTTCCTCACCATCTTCTCACCCTCACAAG
Trifolium repens mRNA, clone: WCC29j16_054, unspecified EST.
FY464361.1:22-42
TGGTTTCTTCTTCTTCTTCCT22CCCTTCTCATTTTCACTTTCCTCTTCCTCACCATCTTCTCACCCTCACAAG
Trifolium repens mRNA, clone: WCC40g05_075, unspecified EST.
FY468237.1:19-39
TGGCTTCTTCTTCTTCCT19CCCTTCTCATTTTCACTTTCCTCTTCCTCACCATCTTCTCACCCTCACAAG
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:30152611-30152631
ATCTTTCTCCAATGGCTTCTTCTTCTTCCT30152611CCCTTCTCATTTTCACTTTCCTCTTCCTCACCATCTTCTCACCCTCACAAG
Primula veris genome assembly, chromosome: 8.
OY821747.1:6722821-6722841
ACTCTTTTCTTCCCCCTCTCTCTCTTTTTT6722821CCCTTCTCATTTTCACTTTCCAAAATGCTCTCTAAATATCTCCCAATACTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAAAGTGAAAATGAGAAGGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAAAGTGAAAATGAGAAGGG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.106 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=GGAAAGTGAAAATGAGAAGGG&k=0&no_gap=0&offset=0&limit=50
0.544 | 0.437 | search_minus_done; http://172.18.8.135:50400/match?q=CCCTTCTCATTTTCACTTTCC&k=0&no_gap=0&offset=0&limit=48
0.549 | 0.006 | cgi_end;

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