GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 19:28:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

eca01-7cs1-a04 Eca01 Eschscholzia californica cDNA clone eca01-7cs1-a04 5', mRNA sequence.
CK750351.1:306-324
AAGGGACGATCCCTAGTCACAAATGTGATT306GGAAATGCCAAAACGAACGTGGTCTGTGGAAATGTATATATTTGCAAGC
Trifolium repens isolate ACLI19 chromosome 05_0cc.
CP125844.1:44644241-44644259
ATGGTCCAAGTCATGTTCACAAATGCGACT44644241GGAAATGCCAAAACGAACGTGTTTGCGGAAACATGTTTCGCTGCAAGCT
Trifolium repens isolate ACLI19 chromosome 05_Pall.
CP125845.1:45350798-45350816
ATGGTCCAAGTCATGTTCACAAATGCGACT45350798GGAAATGCCAAAACGAACGTGTTTGCGGAAACATGTTTCGCTGCAAGCT
Trifolium subterraneum genome assembly, chromosome: 7.
OX637467.1:38871331-38871349
ATGGTCCAAGTCATGTTCACAAATGCGACT38871331GGAAATGCCAAAACGAACGTGTTTGCGGAAACATGTTTCGCTGCAAGCT
Trifolium dubium genome assembly, chromosome: 8.
OX638069.1:11577998-11578016
ATGGTCCAAGTCTTGTTCACAAATGCGACT11577998GGAAATGCCAAAACGAACGTGTTTGCGGAAACATGTTTCGCTGCAAGCT
Portevinia maculata genome assembly, chromosome: 4.
OX454528.1:63355192-63355210
CCAACAAAACCCAGCGATTGACGTATTTTT63355192GGAAATGCCAAAACGAACGCATAATCATCAGATAGTCCGCCAGAAAATC
Trifolium dubium genome assembly, chromosome: 6.
OX638067.1:9271404-9271422
AGCTTGCAGCGAAACATGTTTCCGCAAACA9271404CGTTCGTTTTGGCATTTCCAGTCGCATTTGTGAACAAGACTTGGACCAT
Trifolium fragiferum genome assembly, chromosome: 3.
OX940791.1:18591537-18591555
AGCTTGCAGCGAAACATGTTTCCGCAAACA18591537CGTTCGTTTTGGCATTTCCAGTCGCATTTGTGAACATGACTTGGACCAT
Spirosoma aureum strain BT328 chromosome, complete genome.
CP050063.1:3284089-3284107
CAAGGTAGTAAAATTTGAAGCGGGCCGTTT3284089CGTTCGTTTTGGCATTTCCGCGATAGGTAGCCGCTTTGGCTGGGTTCAG
Anopheles nili genome assembly, chromosome: 2.
OX031310.1:59774184-59774202
TCTTTCCAGGGCGAGCAGAGTTCGCTCCTT59774184CGTTCGTTTTGGCATTTCCCGGGGGGAGTTTTGGGCTGAACTAATCCAG
Suillia variegata genome assembly, chromosome: 2.
OX421843.1:44699135-44699153
TTTTGAATGAATGCTGGAATTCATTCGTTT44699135CGTTCGTTTTGGCATTTCCAGATACGAATCGCCGTTGTCGCTGTTGTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAAATGCCAAAACGAACG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAAATGCCAAAACGAACG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.127 | 0.118 | search_plus_done; http://172.18.8.135:50400/match?q=GGAAATGCCAAAACGAACG&k=0&no_gap=0&offset=0&limit=50
0.146 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=CGTTCGTTTTGGCATTTCC&k=0&no_gap=0&offset=0&limit=44
0.150 | 0.003 | cgi_end;

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