GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 20:53:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Scophthalmus maximus genome assembly, chromosome: 1.
OY978252.1:4556107-4556126
AACGTGAGATGCCCGCCAGGAGGAGGAGGA4556107GGAGGAGAGGAAGAAATCGCATGTTGCCAAAAACACATTAATCCTGAGGT
ZCY111D03.F ZCY Panicum hallii genomic 5', genomic survey sequence.
KO640036.1:723-742
TAGGAACTAGCGAGGATGCGACGGTCTGAT723GGAGGAGAGGAAGAAATCGCACGGTGTATGCAGGACGTGCAACTTGATGA
Scophthalmus maximus chromosome 1.
CP026243.1:27188294-27188313
ACCTCAGGATTAATGTGTTTTTGGCAACAT27188294GCGATTTCTTCCTCTCCTCCTCCTCCTCCTCCTGGCGGGCATCTCACGTT
Gymnoscopelus microlampas genome assembly, chromosome: 18.
OY732720.1:36409585-36409604
AGTTCTTCTTCTGAGAGGGAAGACATTGAT36409585GCGATTTCTTCCTCTCCTCCTCCCAAAACCCTCTTGAATTCCTCTTCTTC
Arachis hypogaea DNA, clone: AHGS40O23.
DH961591.1:62-81
GATGGCGGCGATGGAGCCCAACACGCCAGC62GCGATTTCTTCCTCTCCTCCTCTTCTTCTCCGTGGTCCCTTCCCCTTTTC
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:105376503-105376522
GATGGCGGCGGTGGAGCCCAGCACGCCGGC105376503GCGATTTCTTCCTCTCCTCCTCCCCTTCTCCGCGGTCCCTTCCTCTGTTT
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:105422464-105422483
GATGGCGGCGATGGAGCCCAACACGCCAGC105422464GCGATTTCTTCCTCTCCTCCTCTTCTTCTCCGTGGTCCCTTCCCCTTTTC
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:103046185-103046204
GATGGCGGCGGTGGAGCCCAGCACGCCGGC103046185GCGATTTCTTCCTCTCCTCCTCCCCTTCTCCGCGGTCCCTTCCTCTGTTT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:103092134-103092153
GATGGCGGCGATGGAGCCCAACACGCCAGC103092134GCGATTTCTTCCTCTCCTCCTCTTCTTCTCCGTGGTCCCTTCCCCTTTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAGGAGAGGAAGAAATCGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAGGAGAGGAAGAAATCGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.161 | 0.152 | search_plus_done; http://172.18.8.135:50400/match?q=GGAGGAGAGGAAGAAATCGC&k=0&no_gap=0&offset=0&limit=50
0.204 | 0.043 | search_minus_done; http://172.18.8.135:50400/match?q=GCGATTTCTTCCTCTCCTCC&k=0&no_gap=0&offset=0&limit=48
0.208 | 0.005 | cgi_end;

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