GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 21:42:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Acomys percivali genome assembly, chromosome: 3.
OU015744.1:82979136-82979155
CCAGGAGAGGTCTAAGTGTGTCCTCTACAA82979136GGAGGCTCTTTGATGTTGGAGGCACACTGAAGAAGAAGATGGGAGGCCCT
Andrena haemorrhoa genome assembly, chromosome: 6.
OU342945.1:27465328-27465347
GATCGAAAATTAGGAAAAGCTTAGTTTTTG27465328GGAGGCTCTTTGATGTTGGAATATGGATGAGCAATTAGGTGGAATGTATT
Macaca fascicularis complete genome, chromosome chr2.
LT160001.1:185288623-185288642
TTACAAAGGTTTAATAATTTGAATGTTACT185288623TCCAACATCAAAGAGCCTCCTCCCTTGAACTTTCAGTGGTTACCGATTTG
Sciurus carolinensis genome assembly, chromosome: 2.
LR738591.1:167902260-167902279
ACCTGTGGGTCAGGGCCTTCACAGCCCTCC167902260TCCAACATCAAAGAGCCTCCTGCTCCTTCCCTACTGGGGGCTCCAGTACC
Dianthus caryophyllus mRNA, clone: CES09J06, 5' end sequence.
FY385722.1:72-91
ACATCACATATTGCATCAACGAAGCTCAAA72TCCAACATCAAAGAGCCTCCACACTTTACCAGACATAATGCTTCTACATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAGGCTCTTTGATGTTGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAGGCTCTTTGATGTTGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.120 | 0.111 | search_plus_done; http://172.18.8.135:50400/match?q=GGAGGCTCTTTGATGTTGGA&k=0&no_gap=0&offset=0&limit=50
0.204 | 0.084 | search_minus_done; http://172.18.8.135:50400/match?q=TCCAACATCAAAGAGCCTCC&k=0&no_gap=0&offset=0&limit=48
0.206 | 0.002 | cgi_end;

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