GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:43:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 1, clone: LjT37G03, TM0675.
AP007507.2:90847-90867
CTTAGTGCCAGATAAGTTTAGAGTTTCTTA90847GGATTGGATATTACAAGAGCTGTATAAAAATCTTCTCACAATTAGACTCAT
Lotus japonicus genomic DNA, chromosome 1, clone: LjB70O07, BM1196.
AP007888.2:154710-154730
CTTAGTGCCAGATAAGTTTAGAGTTTCTTA154710GGATTGGATATTACAAGAGCTGTATAAAAATCTTCTCACAATTAGACTCAT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:104003973-104003993
CTTAGTGCCAGATAAGTTTAGAGTTTCTTA104003973GGATTGGATATTACAAGAGCTGTATAAAAATCTTCTCACAATTAGACTCAT
Caenorhabditis sinica genome assembly, chromosome: I.
OZ009942.1:5905715-5905735
CATTCCCTTCCAAAGTGGATTGTTTTTGGA5905715GGATTGGATATTACAAGAGCTCATAACTAGATCAAATGTTTGCTTCCAACT
Ailanthus altissima genome assembly, chromosome: 20.
OX327702.1:11728644-11728664
TTTAGATATCACTAACTCTTATAACCTGAT11728644AGCTCTTGTAATATCCAATCCCTATTAGTAGTATTGGCGCTTAGATTTTAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGATTGGATATTACAAGAGCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGATTGGATATTACAAGAGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=GGATTGGATATTACAAGAGCT&k=0&no_gap=0&offset=0&limit=50
0.116 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=AGCTCTTGTAATATCCAATCC&k=0&no_gap=0&offset=0&limit=46
0.117 | 0.001 | cgi_end;

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