GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:39:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Apodemus sylvaticus genome assembly, chromosome: 6.
OX359303.1:77368264-77368283
AAGAAAAATTTGTTGATAGAAAAAAATTAA77368264GGCAAAATGCAGGTGAAAATGTTCTCTTGTCTCATTCTCACATCTTTAAG
Plasmodium coatneyi strain Hackeri chromosome 6, complete sequence.
CP016244.1:78730-78749
CTATTTTCATCTTTTTTTTTCCGTCCTGTA78730GGCAAAATGCAGGTGAAAATTTATTTATTGTATTGAATAGGGGGGTACTT
Caenorhabditis briggsae isolate VX34 chromosome I.
CP092620.1:6699561-6699580
TTCTTGGCAACGGCGACGCGGGAATGGAAA6699561GGCAAAATGCAGGTGAAAATTGGGTTAGTTAGTAAATATATATTCATAGT
Udea ferrugalis genome assembly, chromosome: 2.
OX465517.1:16169190-16169209
TGGCAGAAAGGTATCGTTTTAGACAAAGGA16169190GGCAAAATGCAGGTGAAAATATGTCGACGTACGTGGCGGAACTGAAAAAA
Udea ferrugalis genome assembly, chromosome: 17.
OX465532.1:2293682-2293701
TGGAAGAAAGGTATCGTTTTAGACAAAGGA2293682GGCAAAATGCAGGTGAAAATATGTCGACGTACGTGGCGGAACTGAAAAAA
Udea ferrugalis genome assembly, chromosome: 23.
OX465538.1:6440596-6440615
TGGCAGAAAGGTATCGTTTTAGACAAAGGA6440596GGCAAAATGCAGGTGAAAATATGTCGACGTACGTGGCGGAACTGAAAAAA
Udea ferrugalis genome assembly, chromosome: 28.
OX465543.1:4301314-4301333
TGGCAGAAAGGTATCGTTTTAGACAAAGGA4301314GGCAAAATGCAGGTGAAAATATGTCGACGTACGTGGCGGAACTGAAAAAA
Erithacus rubecula genome assembly, chromosome: 16.
LR812119.1:8018452-8018471
TAAGACTGAATCTTACATACACCTCTGCTT8018452ATTTTCACCTGCATTTTGCCCCACATATAATTCAAAATTTGCAATTTGTA
MAG: Alistipes putredinis isolate nC33_bin.104.fa chromosome, complete genome.
CP091730.1:4705-4724
AAGATACTAACAAGCTGAGCGCAAAAACAA4705ATTTTCACCTGCATTTTGCCGTGGCACGGAGTATCTTCGTCGAGGCCAAA
Cydia amplana genome assembly, chromosome: 8.
OX419662.1:19599558-19599577
CTTTTTCAACTCCGCCACATACGTAGATAC19599558ATTTTCACCTGCATTTTGCCGCCTTTGTCGAAACCGGTATCTTTCCGCTA
Cydia amplana genome assembly, chromosome: 11.
OX419665.1:18507374-18507393
CTTTTTCAACTCCGCCACATACGTAGATAC18507374ATTTTCACCTGCATTTTGCCGCCTTTGTCGAAACCGGTATCTTTCCGCTA
Cydia amplana genome assembly, chromosome: 21.
OX419675.1:9297227-9297246
CTTTTTCAACTCCGCCACATACGTAGATAC9297227ATTTTCACCTGCATTTTGCCGCCTTTGTCGAAACCGGTATCTTTCCGCTA
Udea ferrugalis genome assembly, chromosome: 2.
OX465517.1:2122944-2122963
TTTTTTCAGTTCCGCCACGTACGTCGACAT2122944ATTTTCACCTGCATTTTGCCTCCTTTGTCTAAAACGATACCTTTCTGCCA
Udea ferrugalis genome assembly, chromosome: 4.
OX465519.1:19539360-19539379
TTTTTTCAGTTCCGCCACGTACGTCGACAT19539360ATTTTCACCTGCATTTTGCCTCCTTTGTCTAAAACGATACCTTTCTGCCA
Udea ferrugalis genome assembly, chromosome: 27.
OX465542.1:5554028-5554047
TTTTTTCAGTTCCGCCACGTACGTCGACAT5554028ATTTTCACCTGCATTTTGCCTCCTTTGTCTAAAACGATACCTTTCTGCCA
Ceriagrion tenellum genome assembly, chromosome: 1.
OY720632.1:6646689-6646708
GAAATTGAATTGAAATGCATAGTAGTCACA6646689ATTTTCACCTGCATTTTGCCATTTTCCTCAAATTCAGATACTCAAATCAT
Magelona johnstoni genome assembly, chromosome: 10.
OZ012693.1:9862599-9862618
AAAATGTGGGTCACTTAGTTAAGATGTACG9862599ATTTTCACCTGCATTTTGCCTGTTTTGAAAGACAAGCCTTAAGGTAGAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCAAAATGCAGGTGAAAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCAAAATGCAGGTGAAAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=GGCAAAATGCAGGTGAAAAT&k=0&no_gap=0&offset=0&limit=50
0.133 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=ATTTTCACCTGCATTTTGCC&k=0&no_gap=0&offset=0&limit=43
0.139 | 0.007 | cgi_end;

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