GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 00:38:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

SlLH03c08g04f1 squirrel heart library 1 Callospermophilus lateralis cDNA clone 08g04 5', mRNA sequence.
CO734304.1:398-417
TCTTCAGGTGTTCCAGTGTCAGGGTCCTTG398AGGCTTGATGAACTGTTGCCCAGTGAAGGCTTCATACAGAGCAATATGAG
KS23001A04 KS23 Capsicum annuum cDNA, mRNA sequence.
GD111026.1:75-94
CTTCAGTACTGTGCATGTTAATCAATCATC75AGGCTTGATGAACTGTTGCCTTTCATATGCCAGTTTATCTATCTATCACT
KS24043G04 KS24 Capsicum annuum cDNA, mRNA sequence.
GD121888.1:62-81
CTTCAGTACTGTGCATGTTAATCAATCATC62AGGCTTGATGAACTGTTGCCTTTCATATGCCAGTTTATCTATCTATCACT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 6.
CP124714.1:171913072-171913091
TTTCAGTACTGTGCATGTTAATCAATCATC171913072AGGCTTGATGAACTGTTGCCTTTCATATGCCAGTTTATCACTTCATGTGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 12.
CP124720.1:262288048-262288067
CTTCAGTACTGTGCATGTTAATCAATCATC262288048AGGCTTGATGAACTGTTGCCTTTCATATGCCAGTTTATCTATCTATCACT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCAACAGTTCATCAAGCCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCAACAGTTCATCAAGCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=GGCAACAGTTCATCAAGCCT&k=0&no_gap=0&offset=0&limit=50
0.276 | 0.182 | search_minus_done; http://172.18.8.135:50400/match?q=AGGCTTGATGAACTGTTGCC&k=0&no_gap=0&offset=0&limit=50
0.280 | 0.004 | cgi_end;

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