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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-02 03:23:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pv056B_M13F_A08.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE709311.1:274-293
GTGATAGACTTTGACTTGTATGATCTTCTG274GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGGGGCATATCGGTC
Pv036B_M13F_B12.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE709312.1:266-285
GTGATAGACTTTGACTTGTATGATCTTCTG266GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGGGGCATATCGGTC
Pv008D_M13F_E04.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE709313.1:266-285
GTGATAGACTTTGACTTGTATGATCTTCTG266GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGGGGCATATCGGTC
Pv021A_M13F_G04.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE709314.1:266-285
GTGATAGACTTTGACTTGTATGATCTTCTG266GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGGAGCATATCGGTC
Vigna angularis mRNA, clone: VEPS07L24.
HX941292.1:206-225
GTGATAGACTTTGACCTGTATGAGCTTCTG206GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGTGGCATATCGCAA
Vigna angularis mRNA, clone: VES07A06.
HX944728.1:228-247
GTGATAGACTTTGACCTGTATGAGCTTCTG228GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGTGGCATATCGCAA
Vigna angularis mRNA, clone: VES19M24.
HX949553.1:254-273
GTGATAGACTTTGACCTGTATGAGCTTCTG254GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGTGGCATATCGCAA
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC H018P13, *** SEQUENCING IN PROGRESS ***, 23 unordered pieces.
AC271264.1:158369-158388
GTGATAGACTTTGACTTGTATGAGCTTCTG158369GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGTGGCATATCGCAA
Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
AP015043.1:489337-489356
GTGATAGACTTTGACCTGTATGAGCTTCTG489337GGCATAGACAGCTCGTGTGATCAGTCAGAGGTGAAAGTGGCATATCGCAA
PV_GBa0035A09.r PV_GBa Phaseolus vulgaris genomic clone PV_GBa0035A09 3', genomic survey sequence.
EI439739.1:99-118
GACCGATATGCCCCTTTCACCTCTGACTGA99TCACACGAGCTGTCTATGCCCAGAAGCTCATACAAGTCAAAGTCTATCAC
Vigna unguiculata cultivar Xiabao 2 chromosome Vu02.
CP039348.1:3628637-3628656
TTGCGATATGCCACTTTCACCTCTGACTGA3628637TCACACGAGCTGTCTATGCCCAGAAGCTCATACAAGTCAAAGTCTATCAC
Sphenostylis stenocarpa genome assembly, chromosome: 2.
OY731399.1:21393797-21393816
GAGCGATATGCCACTTTCACCTCTGACTGA21393797TCACACGAGCTGTCTATGCCCAGAAGCTCATACAAGTCAAAGTCTACCAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCATAGACAGCTCGTGTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCATAGACAGCTCGTGTGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.561 | 0.553 | search_plus_done; http://172.18.8.135:50400/match?q=GGCATAGACAGCTCGTGTGA&k=0&no_gap=0&offset=0&limit=50
0.608 | 0.046 | search_minus_done; http://172.18.8.135:50400/match?q=TCACACGAGCTGTCTATGCC&k=0&no_gap=0&offset=0&limit=41
0.610 | 0.002 | cgi_end;

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