GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 15:50:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

EG-A11_004_C07 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN599912.1:249-268
CCAAGAAGACCCTGCGGCCGCGCTCTTCTT249CATAGAGAAGGACTTGCGCCCCGGAGCCAGGATGACGTTGCACTTCACCC
EG-A11_006_G04 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600070.1:252-271
CCAAGAAGACCCTGCGGCCGCGCTCTTCTT252CATAGAGAAGGACTTGCGCCCCGGAGCCAGGATGACGTTGCACTTCACCC
EG-A11_009_G10 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600314.1:158-177
CCAAGAAGACCCTGCGGCCGCGCTCTTCTT158CATAGAGAAGGACTTGCGCCCCGGAGCCAGGATGACGTTGCACTTCACCC
DP-KSU_014_G02_3 EST-DP-sukary library Phoenix dactylifera cDNA clone DP-KSU_014_G02_3, mRNA sequence.
JZ770426.1:253-272
CCAAGATGACCCTGCCGCTGCCCTCTTCTT253CATAGAGAAGGACTTGCGCCCCGGAGCCAGGATGACGTTGCACTTCACCC
Elaeis guineensis EST, clone (6lib)_isotig20819.
LM628619.1:230-249
CCAAGAAGACCCTGCGGCCGCGCTCTTCTT230CATAGAGAAGGACTTGCGCCCCGGAGCCAGGATGACGTTGCACTTCACCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCGCAAGTCCTTCTCTATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCGCAAGTCCTTCTCTATG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.105 | 0.096 | search_plus_done; http://172.18.8.135:50400/match?q=GGCGCAAGTCCTTCTCTATG&k=0&no_gap=0&offset=0&limit=50
0.418 | 0.313 | search_minus_done; http://172.18.8.135:50400/match?q=CATAGAGAAGGACTTGCGCC&k=0&no_gap=0&offset=0&limit=50
0.421 | 0.003 | cgi_end;

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