GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:31:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vibrio phage 1.049.O._10N.286.54.B5, partial genome.
MG592431.1:16038-16056
GTGCTTGCCAGTAGTAAACGTGCCAGTAAT16038GGCGCTCTTATTGTGCAGCAAGTTAAAATACCAGTGGGTCACGCCATCG
Vibrio phage 1.050.O._10N.286.48.A6, partial genome.
MG592432.1:16299-16317
GTGCTTGCCAGTAGTAAACGTGCCAGTAAT16299GGCGCTCTTATTGTGCAGCAAGTTAAAATACCAGTGGGTCACGCCATCG
Spirometra erinaceieuropaei genome assembly, scaffold: SPER_scaffold0037363.
LN038232.1:6281-6299
GCGCGTCGAACCAGGGCGTATACGGGATTA6281GGCGCTCTTATTGTGCAGCTATCGGAATGTACATAATCTTCGATAGTGT
Andrena dorsata genome assembly, chromosome: 3.
OV815489.1:51797050-51797068
CGAAAACTGTGCCCGTTTCACATGGGTTTT51797050GCTGCACAATAAGAGCGCCCATCAAGTCGGGGGTGTACGGCGGAGAGTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCGCTCTTATTGTGCAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCGCTCTTATTGTGCAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=GGCGCTCTTATTGTGCAGC&k=0&no_gap=0&offset=0&limit=50
0.117 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=GCTGCACAATAAGAGCGCC&k=0&no_gap=0&offset=0&limit=47
0.118 | 0.001 | cgi_end;

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