GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 22:14:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Logfia minima genome assembly, chromosome: 10.
OY992772.1:22070165-22070184
AGTGATGTCCGAGCCTTGACCCTTACGGGT22070165GGCTTTCATCAAATCCTCCATGGATTGATTATCGGGATTGGCCATTAAAT
Logfia minima genome assembly, chromosome: 11.
OY992773.1:14256823-14256842
AGTGATGCCCGAGCCTTGACCCTTACGGGT14256823GGCTTTCATCAAATCCTCCATGGATTGATTATCGGGATTGGCTATTGGAA
Lacanobia wlatinum genome assembly, chromosome: 2.
OX388024.1:28404075-28404094
GTAGGTGGCTACGTCAATTGCATCGTCGTT28404075GGCTTTCATCAAATCCTCCAAAGTACATACAGGAGTATGGGCACTTGGGG
Dianthus caryophyllus mRNA, clone: CES02I03, 5' end sequence.
FY383036.1:370-389
TCAAGACCTAATAAATGGGCTTCAAAATTG370TGGAGGATTTGATGAAAGCCCAACCTCATGGTACCATAATAACTTGACTC
Logfia minima genome assembly, chromosome: 1.
OY992763.1:29196359-29196378
CTATTATGGCCAATCCCGATAATCAATCCA29196359TGGAGGATTTGATGAAAGCCACTCGTAAGGGTCAAGGCTCGGCCATCACT
Logfia minima genome assembly, chromosome: 3.
OY992765.1:28375452-28375471
ATCCAGTGGCCAATCCCAATAATCAATCCA28375452TGGAGGATTTGATGAAAGCCACCCGTACGGGTCAAGGCTCGGCCATTACT
Logfia minima genome assembly, chromosome: 10.
OY992772.1:22545461-22545480
ATCCAATGGCCAATCCCGATAATCAATCCA22545461TGGAGGATTTGATGAAAGCCACCCGTACGGGTCAAGGCTCGGCCATTACT
Mythimna vitellina genome assembly, chromosome: Z.
OX438684.1:37604703-37604722
TCGGCAAACAACACCTTTGCAGGAGCACTT37604703TGGAGGATTTGATGAAAGCCACCGAAGCTGCTATTAACGTAGCCACCTAC
Lacanobia oleracea genome assembly, chromosome: 13.
OX493398.1:10613455-10613474
AGCTAAAGCTGCTCAATAACACCTGTACTT10613455TGGAGGATTTGATGAAAGCCACCGATCGATGTTGCAATTAACGTAGCCAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCTTTCATCAAATCCTCCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCTTTCATCAAATCCTCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.101 | 0.092 | search_plus_done; http://172.18.8.135:50400/match?q=GGCTTTCATCAAATCCTCCA&k=0&no_gap=0&offset=0&limit=50
0.196 | 0.095 | search_minus_done; http://172.18.8.135:50400/match?q=TGGAGGATTTGATGAAAGCC&k=0&no_gap=0&offset=0&limit=47
0.200 | 0.004 | cgi_end;

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