GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 16:48:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:57901012-57901031
AAATCAAAATTTCTTTCAATGGATCTATGA57901012GGGACAAAAGAAAATAACGCATAAATTATACTACAGTAAAATTTACATAT
Sepia lycidas genome assembly, chromosome: 21.
OZ010591.1:38232190-38232209
TGATGCTCACAGGACATAACGAAAAAAAGA38232190GGGACAAAAGAAAATAACGCATGATCTAACGAGAAAGCTTGAGTAAATGA
Conger conger genome assembly, chromosome: 11.
OY741324.1:40044400-40044419
GATGGGTAATATTACTCCAATCTCATTTCT40044400GCGTTATTTTCTTTTGTCCCACAAAACACAAATCATTTTTTTTTTTTTTT
Lotus japonicus genomic DNA, chromosome 5, clone: LjT02L13, TM0095c.
AP004936.1:44993-45012
ATATGTAAATTTTACTGTAGTATAATTTAT44993GCGTTATTTTCTTTTGTCCCTCATAGATCCATTGAAAGAAATTTTGATTT
Agriopis marginaria genome assembly, chromosome: 4.
OW029918.1:7311059-7311078
TTTTTGAAGTTTGTTAAAAATAAGCTAGCG7311059GCGTTATTTTCTTTTGTCCCTCTTCGCAATTTCTTGTGCATATTAATTAA
Fragum sueziense genome assembly, chromosome: 9.
OY804600.1:14404439-14404458
TTCGACAAAAGGATACAATGCTGGTTATCA14404439GCGTTATTTTCTTTTGTCCCAATGTTTCCAAAACCCTTTCTATTAGGGAC
Sepia lycidas genome assembly, chromosome: 3.
OZ010573.1:34399516-34399535
CCATTTCCTCAAGCTCTGTAGGCAGTTTAT34399516GCGTTATTTTCTTTTGTCCCTCTTGTATTCAATCTGTCCTGTGAATATCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGGACAAAAGAAAATAACGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGACAAAAGAAAATAACGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=GGGACAAAAGAAAATAACGC&k=0&no_gap=0&offset=0&limit=50
0.120 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=GCGTTATTTTCTTTTGTCCC&k=0&no_gap=0&offset=0&limit=48
0.123 | 0.004 | cgi_end;

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