GGGenome | Results

2025-03-28 07:21:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Medicago truncatula chromosome 6 clone mth2-155p7, WORKING DRAFT SEQUENCE, 7 ordered pieces.
AC157778.10:69351-69376

GATGCAGAATTAGCATGTAACTTGATTTAA69351GGGTCAAATAGTGTGGATTCAAGCTTAGAACCAATGGCACCAGAATCAGCAATGAG

T221056b Medicago truncatula BAC library Medicago truncatula genomic clone 11N15, genomic survey sequence.
AZ757877.1:1-26

1AAGCTTGAATCCACACTATTTGACCCTTAAATCAAGTTACATGCTAATTCTGCATC

Medicago truncatula clone mth2-97k23, WORKING DRAFT SEQUENCE.
AC225514.3:49791-49816

CTCATTGCTGATTCTGGTGCCATTGGTTCT49791AAGCTTGAATCCACACTATTTGACCCTTAAATCAAGTTACATGCTAATTCTGCATC

Medicago truncatula chromosome 6 clone mth2-9p1, complete sequence.
AC127020.16:120288-120313

CTCATTGCTGATTCTGGTGCCATTGGTTCT120288AAGCTTGAATCCACACTATTTGACCCTTAAATCAAGTTACATGCTAATTCTGCATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.104 | 0.095 | search_plus_done; http://172.18.8.135:50400/match?q=GGGTCAAATAGTGTGGATTCAAGCTT&k=0&no_gap=0&offset=0&limit=50
0.131 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=AAGCTTGAATCCACACTATTTGACCC&k=0&no_gap=0&offset=0&limit=49
0.133 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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