GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 11:29:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES06H04, 5' end sequence.
FY384533.1:278-297
CGCCGTCTCAAAAGGAGACGGTGTTAGAGT278GGTACAGAGGAGAGTTCGCGGCGGCCAACGCCATCATCGACGCCCTCTGC
Dianthus caryophyllus mRNA, clone: CES09A11, 5' end sequence.
FY385514.1:281-300
CGCCGTCTCAAAAGGAGACGGTGTTAGAGT281GGTACAGAGGAGAGTTCGCGGCGGCCAACGCCATCATCGACGCCCTCTGC
Dianthus caryophyllus mRNA, clone: CFES06H15, 5' end sequence.
FY396243.1:235-254
CGCCGTCTCAAAAGGAGACGGTGTTAGAGT235GGTACAGAGGAGAGTTCGCGGCGGCCAACGCCATCATCGACGCCCTCTGC
Dianthus caryophyllus mRNA, clone: CFES09C16, 5' end sequence.
FY397256.1:235-254
CGCCGTCTCAAAAGGAGACGGTGTTAGAGT235GGTACAGAGGAGAGTTCGCGGCGGCCAACGCCATCATCGACGCCCTCTGC
Dianthus caryophyllus mRNA, clone: CFES13_B02, 5' end sequence.
FY398730.1:289-308
CGCCGTCTCAAAAGGAGACGGTGTTAGAGT289GGTACAGAGGAGAGTTCGCGGCGGCCAACGCCATCATCGACGCCCTCTGC
Jasminum sambac cultivar Hutoumoli linkage group Lg10.
CP073641.1:34489541-34489560
AGGCTTTCGCTAAGGACTCAATCATTGCGT34489541GGTACAGAGGAGAGTTCGCGGCGGCCAACGCCATCATTGATGAGCTGTGC
Malus hybrid cultivar cultivar Flame chromosome 3.
CP141912.1:34176498-34176517
ACCAACTGGCGAAGGACGCAATTATCGGGT34176498GGTACAGAGGAGAGTTCGCGGCGGCAAATGCAATCATCGATGCCCTCTGC
Malus hybrid cultivar cultivar Flame chromosome 3.
CP141929.1:36496248-36496267
ACCAGCTGGCGAAGGACGCAATTATCGGGT36496248GGTACAGAGGAGAGTTCGCGGCGGCAAATGCAATCATCGATGCCCTCTGC
Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143360.1:34816302-34816321
ACCAGCTGGCGAAGGACGCAATTATCGGGT34816302GGTACAGAGGAGAGTTCGCGGCGGCAAATGCAATCATCGATGCCCTCTGC
Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143377.1:32463542-32463561
ACCAGCTGGCGAAGGACGCAATTATCGGGT32463542GGTACAGAGGAGAGTTCGCGGCGGCAAATGCAATCATCGATGCCCTCTGC
Malus sylvestris genome assembly, chromosome: 3.
OU696505.1:34576083-34576102
ACCAGCTGGCGAAGGACGCAATTATCGGGT34576083GGTACAGAGGAGAGTTCGCGGCGGCAAATGCAATCATCGATGCCCTCTGC
Malus domestica genome assembly, chromosome: 3.
OU696679.1:35987924-35987943
ACCAGCTGGCGAAGGACGCAATTATCGGGT35987924GGTACAGAGGAGAGTTCGCGGCGGCAAATGCAATCATCGATGCCCTCTGC
Malus domestica genome assembly, chromosome: 3.
OU744544.1:35708438-35708457
ACCAGCTGGCGAAGGAGGCAATTATCGGGT35708438GGTACAGAGGAGAGTTCGCGGCGGCAAATGCAATCATCGATGCCCTCTGC
Malus domestica genome assembly, chromosome: 3.
OU744955.1:35051055-35051074
ACCAGCTGGCGAAGGACGCAATTATCGGGT35051055GGTACAGAGGAGAGTTCGCGGCGGCAAATGCAATCATCGATGCCCTCTGC
Malus domestica genome assembly, chromosome: 3.
OU744993.1:35780386-35780405
ACCAGCTGGCGAAGGACGCAATTATCGGGT35780386GGTACAGAGGAGAGTTCGCGGCGGCAAATGCAATCATCGATGCCCTCTGC
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:82925831-82925850
CAGCCCCGATCTAGAAACGGCGGCCGCGGC82925831GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:108162717-108162736
CAGCCCTGATCTTGAAACGGCGGCGACGGC108162717GGTACAGAGGAGAGTTCGCGAGAAAGAGATCGATATTAGGGATTTCCACC
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:115328846-115328865
CGGCCCCGATCTTGAAACGACGACGGCGGC115328846GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGCTTTCCACC
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:117311970-117311989
AAGCCCCGATCTTGAAATGGCGGCGGCGGC117311970GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATCTTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:179340821-179340840
CAGCCCCGATCTTGAAACGGCGGAGGCGGC179340821GGTACAGAGGAGAGTTCGCGAAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:224582541-224582560
CAGCCCCGATCTTTAAACAGCGGCGGTGGC224582541GGTACAGAGGAGAGTTCGCGGAAAAGAGATTGATATTAGGGGGTTCCACC
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:246484818-246484837
CAGCCCCGATCTAGAAACGGCGGCGGCGGC246484818GGTACAGAGGAGAGTTCGCGGAAAATAGATTGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:328684739-328684758
CAGCCCTGATCTTGAAACGGCGGCGGCGGC328684739GGTACAGAGGAGAGTTCGCGAAAAAATGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:340419533-340419552
CAGCCCCGATCTTGAAACGGCGGCGGCGGC340419533GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCACCC
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:356092481-356092500
CATCCCCGATCTAGAAACGGCGGCGGAGGC356092481GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:25929000-25929019
CAGCCCCGATCTTGAAACGGCGGCGGCGGC25929000GGTACAGAGGAGAGTTCGCGAGAAAGAGATCGATATTAGGGGCTTCCACC
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:32727060-32727079
AGGCAGCACCGATCTTGAAACGGCGGCGGC32727060GGTACAGAGGAGAGTTCGCGGAAAAGATATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:126174443-126174462
CACCCCCGATCTTGAAACGGCGGCGGCGTC126174443GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGATTTCCACC
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:152416588-152416607
AGGCAGCCCCGATCTTGAAACGGCGGCGGC152416588GGTACAGAGGAGAGTTCGCGGAAAAGAGAACGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:331405801-331405820
CAGCCCCGATCTAGAAACGGCGGCGGTGGC331405801GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:394371826-394371845
CCCCGATCTTGAAACAGCGGCGGCGGCGGC394371826GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:403778687-403778706
CAGCCCTAATCTTGAAATGGCGGCGGCGGC403778687GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:420420003-420420022
AAGCCCCGATCTTGAAACGGCGGCGGCGGC420420003GGTACAGAGGAGAGTTCGCGGAAAAGTGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:206077985-206078004
CAGCCCCGATCTTGAAATGGCGGCGGCTGC206077985GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:297415199-297415218
CAGCCCCGATCTTGAAACGGGGGCGGCGGC297415199GGTACAGAGGAGAGTTCGCGAGAAAGAGATCGATATTATAGGTTTCTACC
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:383391031-383391050
CAGACCCGATCTTGAAACGGCGGCGGCGGC383391031GGTACAGAGGAGAGTTCGCGGAAAAGAGATAGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:383424200-383424219
CAGCCCCGATCTTGGAACGGCGGCGGCGGC383424200GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:411783618-411783637
CAGCCCCGATCTTGAAACGGCGGCGGCGGC411783618GGTACAGAGGAGAGTTCGCGAGAAAGACATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:34315962-34315981
CAGCCCCGATCTTGAAACGGCGGCGGCGGC34315962GGTACAGAGGAGAGTTCGCGAGAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:42177326-42177345
CAGCCCCGATCTTGAAACGGCGGCGGCGGT42177326GGTACAGAGGAGAGTTCGCGAGAAAGAGATCGATCTTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:68864901-68864920
CAGCCCCGATCTAGAAACGACGACGGCAGA68864901GGTACAGAGGAGAGTTCGCGAAAAAGAGATCCGTCTTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:83664969-83664988
AAGCCCCGATCTTGAAACGGCGGCGGCGGC83664969GGTACAGAGGAGAGTTCGCGAAAAAGAGATCGATCTTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:95281831-95281850
CAGCCCCGATCTTGAAACGGCGGCGGCGGT95281831GGTACAGAGGAGAGTTCGCGGAAAAGAGATTGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:125345216-125345235
CAGCCCCGATCTTGAAACGGCGGCGGCGGC125345216GGTACAGAGGAGAGTTCGCGAGAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:236120310-236120329
CAGCCCCGATCTTGAAACGGCGGCGGCGGC236120310GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATCTTAGGGTTTTCCACC
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:250255361-250255380
CAGCCCCGATCTTGAAACGGCGGCGGCGGC250255361GGTACAGAGGAGAGTTCGCGGAAAAGATATCGTTATTAGGGGTTTCCACT
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:317534115-317534134
CCCCAATCTAGAAACGGCGGCGGCGGCGGC317534115GGTACAGAGGAGAGTTCGCGAAAAAGAGATCCTTCTTAGGGCTTTCCACC
Bromus sterilis genome assembly, chromosome: 5.
OX465599.1:18356357-18356376
CAGCCCCGATCTTGAAACGGCGGCGGCGGC18356357GGTACAGAGGAGAGTTCGCGAGAAAGAGATCGATATTAGGGGTTTCCATC
Bromus sterilis genome assembly, chromosome: 5.
OX465599.1:20273662-20273681
AAGCCCCGATCTTGAAACGGCGGCGGCGGT20273662GGTACAGAGGAGAGTTCGCGGAAAAGAGATCTCTATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 5.
OX465599.1:239493708-239493727
CAGCCCCGATCTAGAAACGGCGGTGGCGGC239493708GGTACAGAGGAGAGTTCGCGGAAAAGAGATAAATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 5.
OX465599.1:267629000-267629019
CAGCCCCGATCTTGAAACGGCGGCGGCGGC267629000GGTACAGAGGAGAGTTCGCGAGAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 5.
OX465599.1:316510012-316510031
GCCCGATCTAGAAACAGCAGCGGCGGCGGC316510012GGTACAGAGGAGAGTTCGCGAAAAAGAGATCCCTCCTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 5.
OX465599.1:316568267-316568286
GCCCGATCTAGAAACAGCAGCGGCGGCGGC316568267GGTACAGAGGAGAGTTCGCGAAAAAGAGATCCCTCCTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:117882830-117882849
CAGCCTCGATCTTGAAACGGCGGCGGCGGT117882830GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:153347565-153347584
CAACCCCGATCTAGAAATGACGGCGGCGGC153347565GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:188612008-188612027
CAGCCCCGATCTTGAAACGGCGGCGGCGGC188612008GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTACGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:254242900-254242919
CAGCCCCGATCTTGAAACGGCAGCGGCAGC254242900GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGAGTTTCCACC
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:293002453-293002472
CAGCCCCGATCTAGAAACGGCGGCGGCGGC293002453GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:298430020-298430039
CAGCCCCGATCTTGAAACGGCGGCGGCGGC298430020GGTACAGAGGAGAGTTCGCGAGAAAGAGATCAATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:308299599-308299618
AAGCCCCGATCTTGAAACGGCGGCGGCAGC308299599GGTACAGAGGAGAGTTCGCGAGAAAGAGATCGATCTTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 7.
OX465601.1:72899889-72899908
CAGCCCCGATCTTGAAACGGAGGCGGCGGC72899889GGTACAGAGGAGAGTTCGCGAGAAAGAGATCGATATTATGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 7.
OX465601.1:110289298-110289317
CAGCCCCGATCTTGAAACGGTGGCGGCGGC110289298GGTACAGAGGAGAGTTCGCGAGAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 7.
OX465601.1:161537636-161537655
CAGGCCCGATCTTGAAACGGCGGCGGCGGC161537636GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 7.
OX465601.1:161543152-161543171
GAGCCACGATCTTGAAACGGCGACGACGGT161543152GGTACAGAGGAGAGTTCGCGGAAAAGAGATCGATATTAGGGGTTTCCACC
Bromus sterilis genome assembly, chromosome: 7.
OX465601.1:163849915-163849934
GGGCAGCCCGGATGTTGAAACGGCGGCGGC163849915GGTACAGAGGAGAGTTCGCGAGAAAGAGATCGATATTAGGGGTTTCCACC
Malus x robusta genome assembly, chromosome: 6.
OY720330.1:35111425-35111444
ACCAGCTGGCGAAGGACGCAATTATCGGGT35111425GGTACAGAGGAGAGTTCGCGGCGGCAAATGCAATCATCGATGCCCTCTGC
Pyrus communis genome assembly, chromosome: 14.
OY757081.1:23752770-23752789
ACCAGCTGGCGAAGGACGCAATTATCGGGT23752770GGTACAGAGGAGAGTTCGCGGCGGCAAACGCAATCATCGATTCCCTCTGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGTACAGAGGAGAGTTCGCG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTACAGAGGAGAGTTCGCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.526 | 0.517 | search_plus_done; http://172.18.8.135:50400/match?q=GGTACAGAGGAGAGTTCGCG&k=0&no_gap=0&offset=0&limit=50
0.584 | 0.059 | search_minus_done; http://172.18.8.135:50400/match?q=CGCGAACTCTCCTCTGTACC&k=0&no_gap=0&offset=0&limit=0
0.584 | 0.000 | cgi_end;

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