GGGenome | Results

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2025-04-11 04:31:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:15189709-15189728

GTTTCAGTACAGGATATAAAGGGTGCTGTG15189709GGTGATCAAGAGGCTGCTTTACTTACCAGTCACTTGGAAAGACAACGCCC

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:14986172-14986191

GTTTCAGTACAGGATATAAAGGGTGCTGTG14986172GGTGATCAAGAGGCTGCTTTACTTACCAGTCACTTGGAAAGACAACGCCC

Hippopus hippopus genome assembly, chromosome: 2.
OX328097.1:61756541-61756560

AATTAAGAAAATCCAGGCATCAGTTTAGGA61756541AAAGCAGCCTCTTGATCACCAAGTCTTGTTTAATCAACAAAGTCCACATT

Tridacna derasa genome assembly, chromosome: 3.
OY723416.1:59940403-59940422

AATTAAGAAAATCCAGGCATCAGTTTAGGA59940403AAAGCAGCCTCTTGATCACCAAGTCTTGTTTAATCAACAAAGTCCACATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.109 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=GGTGATCAAGAGGCTGCTTT&k=0&no_gap=0&offset=0&limit=50
0.134 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=AAAGCAGCCTCTTGATCACC&k=0&no_gap=0&offset=0&limit=48
0.136 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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