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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-11 02:26:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sciurus carolinensis genome assembly, chromosome: 5.
LR738594.1:92739032-92739048
GTGATGGCACCTTACTCAGTGCAGTGGTCA92739032GGTGGGGTCAGTCAGTAATGGCCACTGTCTTACACCTGGTGGCTGGG
Heterocephalus glaber genome assembly, chromosome: 13.
OX090953.1:67337251-67337267
CCTGAAGAGGGTGTGCTCACGAACCTGGGA67337251GGTGGGGTCAGTCAGTACCATCCAAATATAAATAGGTCAGGCTGTTT
Heterocephalus glaber genome assembly, chromosome: 13.
OZ001078.1:4524285-4524301
CCTGAAGAGGGTGTGCTCACGAACCTGGGA4524285GGTGGGGTCAGTCAGTACCATCCAAATATAAATAGGTCAGGCTGTTT
Heterocephalus glaber genome assembly, chromosome: 13.
OZ001121.1:4295380-4295396
CCTGAAGAGGGTGTGCTCACGAACCTGGGA4295380GGTGGGGTCAGTCAGTACCATCCAAATATAAATAGGTCAGGCTGTTT
Bos mutus isolate yakQH1 chromosome 11.
CP027079.1:6507735-6507751
ATGGCACAACGGTTGTACCCGTGGGATAGA6507735GGTGGGGTCAGTCAGTAGTTCACAGCTTGTGGCTCTTTGGTGGGAAA
Pipistrellus pipistrellus genome assembly, chromosome: 3.
LR862358.1:39251068-39251084
AAAATAATAGTAATCTTGTCCTGGGTTACT39251068GGTGGGGTCAGTCAGTAATGTCCAATTTGTATATGGATGGCCTCTTT
Bos taurus genome assembly, chromosome: 11.
LR962741.1:6825882-6825898
ATGGCACAACGGTTGTACCCGTGGGATAGA6825882GGTGGGGTCAGTCAGTAGTTCACAGCTTGTGGCTCTTTGGTGGGAAA
Cervus elaphus genome assembly, chromosome: 6.
OU343083.1:12287909-12287925
CCACGGCCCTACACACAACATGGAGCCCAA12287909GGTGGGGTCAGTCAGTATTTGCAGACCAAGTAAACGTCTAAAGGCAA
Orcinus orca genome assembly, chromosome: 11.
OW443371.1:74811084-74811100
AACCTTCCCAGCTTCTTTGGGACGGGGAGG74811084GGTGGGGTCAGTCAGTAGGGGTATGAGGCAGACGTGCTATCTGAGCA
Bos gaurus x Bos taurus genome assembly, chromosome: 11.
OX258965.1:9161787-9161803
ATGGCACAACGGTTGTACCCGTGGGATAGA9161787GGTGGGGTCAGTCAGTAGTTCACAGCTTGTGGCTCTTTGGTGGGAAA
Bos taurus strain mammals genome assembly, chromosome: 11.
OX344700.1:14310884-14310900
ATGGCACAACGGTTGTACCCGTGGGATAGA14310884GGTGGGGTCAGTCAGTAGTTCACAGCTTGTGGCTCTTTGGTGGGAAA
Rangifer tarandus platyrhyncus genome assembly, chromosome: 4.
OX459940.2:9672314-9672330
ATGGCAGGACCGTTGTACCCGTGGGGTAGA9672314GGTGGGGTCAGTCAGTAGTTCACAGCTTGTGGCTCTTTGGTGGGAAA
Delphinus delphis genome assembly, chromosome: 11.
OX465337.1:74223158-74223174
AACCTTCCCAGCTTCTTTGGGACGGGGAGG74223158GGTGGGGTCAGTCAGTAGGGGTATGAGGCAGACGTGCCATCTGAGCA
Rangifer tarandus platyrhyncus genome assembly, chromosome: 3.
OX596087.1:7950344-7950360
ATGGCAGGACCGTTGTACCCGTGGGGTAGA7950344GGTGGGGTCAGTCAGTAGTTCACAGCTTGTGGCTCTTTGGTGGGAAA
Bos taurus genome assembly, chromosome: Bta11.
OY997239.1:9182781-9182797
ATGGCACAACGGTTGTACCCGTGGGATAGA9182781GGTGGGGTCAGTCAGTAGTTCACAGCTTGTGGCTCTTTGGTGGGAAA
Muntiacus reevesi genome assembly, chromosome: 22.
OZ005646.1:12150390-12150406
CCACGGCCCTACGCACAACATGGAGCCCAC12150390GGTGGGGTCAGTCAGTACTTTCAGACCAAGTAAACGTCTAAATGCAA
Chanos chanos genome assembly, chromosome: 9.
LR697114.1:4027330-4027346
ATCCTTATTGGCTGATACGTGATACAAAGG4027330GGTGGGGTCAGTCAGTAAGCTTCCTTCTTGCTGTGTTATTGAGTTGA
Thalassophryne amazonica genome assembly, chromosome: 12.
LR722977.1:62083181-62083197
TATTGCACTGCTGGAGAAGATTCCAGGGAT62083181GGTGGGGTCAGTCAGTACTGTACCCAATGATACAAAGGGTGACTGAG
Scyliorhinus canicula genome assembly, chromosome: 6.
LR744035.1:71505701-71505717
ACCTACAGGAGAATCAACATGTGGTCAGTG71505701GGTGGGGTCAGTCAGTAAGGCAAAAACAACTCACGTTTGACAGGTTG
Rana temporaria genome assembly, chromosome: 8.
LR991687.1:108898267-108898283
AGTGCAAAGATTGGTGTCAGTAGGACAGTG108898267GGTGGGGTCAGTCAGTAGAGGAGTGAACACTGTCAGTAGGGTAGAGG
Pelobates cultripes genome assembly, chromosome: 01.
OW240912.1:368716581-368716597
CTATTGTATTGTGTATTGCATTTGGGGGGA368716581GGTGGGGTCAGTCAGTAGTATATTAGGGGACGGGGTCAGTAATGTAT
Pelobates cultripes genome assembly, chromosome: 04.
OW240915.1:44205920-44205936
CTATTGTATTGTGTATTGCATTTGGGTGGA44205920GGTGGGGTCAGTCAGTAATGTGTGAGGGGAGGGGGTCAGTAATGTAT
Pelobates cultripes genome assembly, chromosome: 05.
OW240916.1:105927856-105927872
CTATTGTATTGTGTATTGCATTTGGGGGGA105927856GGTGGGGTCAGTCAGTAGTATATTAGGGGACGGGGTCAGTAATGTAT
Melanostigma gelatinosum genome assembly, chromosome: 18.
OX456515.1:21252960-21252976
TATATTTGTGAGATACTGTCATGAAGAAGG21252960GGTGGGGTCAGTCAGTATTCCCTTCCCCTGTATGACCAGTTAAACAA
Gymnoscopelus braueri genome assembly, chromosome: 23.
OY725530.1:17213348-17213364
TATGTCTCTGGGTGGAGCCGGGTGGGTGCT17213348GGTGGGGTCAGTCAGTAGTGGATGGTAACAAAGTAATGGTAATGGTT
Raja brachyura genome assembly, chromosome: 14.
OY740794.1:1727135-1727151
GCAGCGGTGCTGTATCTCCCGACTGTGGTG1727135GGTGGGGTCAGTCAGTATATTGCACCAGGTTGGCATCTCCTCGCAGA
CAWU7438.rev CAWU Capitella sp. I ECS-2004 Primary Early Library, Embryos <36 hr after egg deposition Capitella teleta cDNA clone CAWU7438 3', mRNA sequence.
EY604264.1:748-764
ATATCAGCTGCATGGTTGCAAGGCACTCTG748GGTGGGGTCAGTCAGTACATC
HS_2064_B1_E04_MR CIT Approved Human Genomic Sperm Library D Homo sapiens genomic clone Plate=2064 Col=7 Row=J, genomic survey sequence.
AQ246584.1:226-242
ATCCACATAGACAGGTCCCCTGTTCTAAGA226GGTGGGGTCAGTCAGTACCTGATAAACCATTCAGCACTGAGCAGTTT
Bos taurus clone CH240-199D21, WORKING DRAFT SEQUENCE, 9 unordered pieces.
AC169356.3:142395-142411
ATGGCACAACGGTTGTACCCGTGGGATAGA142395GGTGGGGTCAGTCAGTAGTTCACAGCTTGTGGCTCTTTGGTGGGAAA
Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0271E15, *** SEQUENCING IN PROGRESS ***, 223 unordered pieces.
AC261334.1:233791-233807
CAAGAGGATCCGTGGTTGTCCTTGGTAATT233791GGTGGGGTCAGTCAGTAGATTTTTCACTCAGCTAGCGAGGAACCAGT
Solanum verrucosum cultivar 11H23 chromosome 5.
CP133616.1:35291997-35292013
TACGGCCCGTAAGAGAACCTACGGTCTGTC35291997GGTGGGGTCAGTCAGTACTGACGCCAGCTAAGAAAATCTAATTTTTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
HG994375.1:286457343-286457359
CAAGAGGATCCGTGGTTGTCCTTGGTAATT286457343GGTGGGGTCAGTCAGTAGATTTTTCACTCAGCTAGCGAGGAACCAGT
Vicia faba genome assembly, chromosome: 5.
OX451740.1:248496214-248496230
TAAATCATGCTGAAAAGACTTTTGTTGGTT248496214GGTGGGGTCAGTCAGTAATCCTGAAGGCAGTCTGGGACATTATAAAT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460237.1:331981978-331981994
CAAGAGGATCCGTGGTTGTCCTTGGTAATT331981978GGTGGGGTCAGTCAGTAGATTTTTCACTCAGCTAGCGAGGAACCAGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638827.1:318488885-318488901
CAAGAGGATCCGTGGTTGTCCTTGGTAATT318488885GGTGGGGTCAGTCAGTAGATTTTTCACTCAGCTAGCGAGGAACCAGT
Hordeum bulbosum genome assembly, chromosome: 7H_3.
OY737480.1:276366649-276366665
CAAGAGGATCCGTGGCTGTCCTTGGTAATT276366649GGTGGGGTCAGTCAGTAGATTTTTCACTCAGCTAGCGAGGAACCAGT
Hordeum bulbosum genome assembly, chromosome: 3H_4.
OY737663.1:341056512-341056528
CAAGATGATCCGTGGCTGTCCTTGGTAATT341056512GGTGGGGTCAGTCAGTAGATTTTTCACTCAGCTAGCGAGGAACCAGT
Hordeum bulbosum genome assembly, chromosome: 7H_2.
OY737879.1:297923099-297923115
CAAGAGGATCCGTGGCTGTCCTTGGTAATT297923099GGTGGGGTCAGTCAGTAGATTTTTCACTCAGCTAGCGAGGAACCAGT
Alisma plantago-aquatica genome assembly, chromosome: 5.
OY856413.1:759186146-759186162
CACGGGGGAGAGAGCGAGAGAAAGGGGGTG759186146GGTGGGGTCAGTCAGTATGACGTGACCATGTGTGTGGGACTTTTAAT
Alisma plantago-aquatica genome assembly, chromosome: 6.
OY856414.1:66006220-66006236
ATGGAAATGTAAATGGGGAGGGGTGATCAA66006220GGTGGGGTCAGTCAGTAGTAACAATGTTAAGTCTGGCCGGGAGTTGG
Mycolicibacterium fallax JCM 6405 DNA, nearly complete genome.
AP022603.1:2900184-2900200
CACCGGCTGGGGCCGGAGGCCGACCGGGTC2900184GGTGGGGTCAGTCAGTACTGACGGGCCCAGGACTGCACGGCCGCCGG
Erwinia billingiae strain Eb661 complete chromosome.
FP236843.1:3488240-3488256
CATCGCGAAACTGGCAGACACGCCACCCAT3488240GGTGGGGTCAGTCAGTACCGAAATATACGGCAGACCGCGTTCCTGCA
Ochropleura plecta genome assembly, chromosome: 10.
FR997732.1:10349211-10349227
GGCATAATAAAGGGCAAAAGAAGGATCATG10349211GGTGGGGTCAGTCAGTAAAAGTCTGACACTGAAGTTATTTGATGATT
Clostera curtula genome assembly, chromosome: 18.
FR997812.1:3996643-3996659
AATGCTAAATCCGTGCCGCTGCCACCCGGT3996643GGTGGGGTCAGTCAGTATCTGGGACTCCGGAACACTCGACTACCCAC
Hecatera dysodea genome assembly, chromosome: 28.
HG995315.1:10425298-10425314
ACACGTCGTTATAGTATTTGAAGGAACACG10425298GGTGGGGTCAGTCAGTAAGAGTCTGACACTCCCTTCCGCTCCGCCCA
Parapoynx stratiotata genome assembly, chromosome: 27.
OU342484.1:400872-400888
TGAATCGAATCGAATAATATACCATGTTGA400872GGTGGGGTCAGTCAGTACCTTAAGTCGTATATAAAATTTTCTTTTTA
Microctonus brassicae genome assembly, chromosome: 3.
OW445483.1:4232456-4232472
TATATACTGATCGGTTCATAATAAATCACT4232456GGTGGGGTCAGTCAGTACAACAAGGAGAAGAGTATTCATGCTGTTAA
Microctonus brassicae genome assembly, chromosome: 3.
OW675803.1:4232456-4232472
TATATACTGATCGGTTCATAATAAATCACT4232456GGTGGGGTCAGTCAGTACAACAAGGAGAAGAGTATTCATGCTGTTAA
Eupithecia abbreviata genome assembly, chromosome: 10.
OX030983.1:7578110-7578126
TTCCGAACGAAACCACAAACACTATTCTTG7578110GGTGGGGTCAGTCAGTAACGGTAGACACACATTGAAATCTGTCGAAT
Chrysolina oricalcia genome assembly, chromosome: 18.
OX101826.2:17626080-17626096
TGTTACAGCAACTTTAGTTGGAAAAATCAG17626080GGTGGGGTCAGTCAGTACCTTTACATATTCATACTAGTTGGTCAGCT
Chrysolina oricalcia genome assembly, chromosome: 18.
OX101826.2:23504945-23504961
TGTTACAGCAACTTTGGTTGGAAAAATCAG23504945GGTGGGGTCAGTCAGTACCTTTACATATTCATACTAGTTGGTTAGCT
Leptophobia aripa genome assembly, chromosome: 10.
OX637269.1:488946-488962
GATAATGTTAATCGATCTTAAAGTAGGAGT488946GGTGGGGTCAGTCAGTATATCTTACGATATTTGATATAATAAAGATT
Icerya purchasi genome assembly, chromosome: 2.
OX731681.1:380023720-380023736
CGAATATCCCACCATCGAGTATGTAACAGA380023720GGTGGGGTCAGTCAGTAGTTGTTTTTTATATTCTCCGTAGGTAACGA
Orchestes rusci genome assembly, chromosome: 4.
OY293307.1:29759227-29759243
TGGAAAAAGATCGCGGTTAGCTCTCAAAGG29759227GGTGGGGTCAGTCAGTAGGTGCGGGTTCAACTGGTGACGATGCCGTA
Sepiola atlantica genome assembly, chromosome: 6.
OY744520.1:127994738-127994754
TCTATAAATCCTCTCATTCGGCCGTGCAAT127994738GGTGGGGTCAGTCAGTAAAGGACGCCAGGGTGATTTGTCGTATTCCT
Ceramica pisi genome assembly, chromosome: Z.
OY982527.1:8177303-8177319
TGGAACCCAAAACGCACTAAGAGGAAGACG8177303GGTGGGGTCAGTCAGTAAGTCATTTGATTATTTCCCAGCCTTGACAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGTGGGGTCAGTCAGTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTGGGGTCAGTCAGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.264 | 0.256 | search_plus_done; http://172.18.8.135:50400/match?q=GGTGGGGTCAGTCAGTA&k=0&no_gap=0&offset=0&limit=50
0.332 | 0.068 | search_minus_done; http://172.18.8.135:50400/match?q=TACTGACTGACCCCACC&k=0&no_gap=0&offset=0&limit=0
0.332 | 0.000 | cgi_end;

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