GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:29:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

BES_z57N4_F IGS-SCF-0106 Bvu-KWS2320 BAC library Beta vulgaris subsp. vulgaris genomic clone z57N4, genomic survey sequence.
KG031262.1:809-830
AAGGAAAGTTTCTGATGTATTATGCAGTGT809GTAATTTGGTGAATGGTGATTGTCCCCGATTTTACTTGCAGTTTTACTTTGG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392547.1:6851373-6851394
AAGGAAAGTTTCTGATGTATTATGCAGTGT6851373GTAATTTGGTGAATGGTGATTGTCCCCGATTTTACTTGCAGTTTTACTTTGG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:7044625-7044646
AAGGAAAGTTTCTGATGTATTATGCAGTGT7044625GTAATTTGGTGAATGGTGATTGTCCCCGATTTTACTTGCAGTTTTACTTTGG
Polyommatus iphigenia genome assembly, chromosome: Z.
OY730178.1:8316681-8316702
ATACAAAAGTCCTGTTTGATTCACACGAGC8316681GTAATTTGGTGAATGGTGATTGGTGAGTCATGATTTGTAAGAAAAAAATTTA
TSA: Beta vulgaris Locus_3703_Transcript_1/4_Confidence_0.375_Length_835 mRNA sequence.
JP493207.1:81-102
CCAAAGTAAAACTGCAAGTAAAATCGGGGA81CAATCACCATTCACCAAATTACACACTGCATAATACATCAGAAACTTTCCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTAATTTGGTGAATGGTGATTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTAATTTGGTGAATGGTGATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.144 | 0.136 | search_plus_done; http://172.18.8.135:50400/match?q=GTAATTTGGTGAATGGTGATTG&k=0&no_gap=0&offset=0&limit=50
0.168 | 0.023 | search_minus_done; http://172.18.8.135:50400/match?q=CAATCACCATTCACCAAATTAC&k=0&no_gap=0&offset=0&limit=46
0.168 | 0.001 | cgi_end;

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