GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:23:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

JP 1998084965-A/1: Capsicum annuum DNA sequence linked to fertility-restoration gene.
E15675.1:136-157
CAGCTCACGTTGACTACGTCCCTGCCCTTT136GTACACACCACTCGTCGCTCCTGCCGATTGAATGATCCAGTGAAATTTTCAG
JP 1998084965-A/2: Capsicum annuum DNA sequence linked to fertility restoration gene.
E15676.1:136-157
CAGCTCACGTTGACTACGTCCCTGCCCTTT136GTACACACCACTCGTCGCTCCTGCCGATTGAATGATCCAGTGAAATTTTCAG
Solanum pinnatisectum cultivar CGN17745 chromosome 1.
CP047567.1:63328751-63328772
GAGTCATTAGCTTGCGTTGACTACGTCCCT63328751GTACACACCACTCGTCGCTCCTACCGATTAAATGATCCGATATAATGATCGG
Agrostemma githago genome assembly, chromosome: 16.
OY288254.1:18220948-18220969
CAGCTCGCGTTGACTACGTCCCTGCCCTTT18220948GTACACACCACTCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGG
Vaccinium vitis-idaea genome assembly, chromosome: 1.
OY978215.1:1940194-1940215
TAGCTTGCGTTGACTACGTCCCTGCCATTT1940194GTACACACCACTCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATACTGTA
KR 1020160012808-A/9: Nucleic acid molecules and primer sets related to restoration of male sterility in pepper and uses thereof.
LG142596.1:69522-69543
CTGAAAATTTCACTGGATCATTCAATCGGC69522AGGAGCGACGAGTGGTGTGTACAAAGGGCAGGGACGTAGTCAACGTGAGCTG
Gossypium herbaceum isolate GPA1alz chromosome 11.
CP106704.1:100497686-100497707
CCGAACACTTCACTGGACCATTCAATCGGT100497686AGGAGCGACGAGTGGTGTGTACAAAGGGCAGGGACGTTGTTAACGCGAGCTG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:246575398-246575419
CTGAAAATTTCACTGGATCATTCAATCGGC246575398AGGAGCGACGAGTGGTGTGTACAAAGGGCAGGGACGTAGTCAACGTGAGCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTACACACCACTCGTCGCTCCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTACACACCACTCGTCGCTCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.141 | 0.132 | search_plus_done; http://172.18.8.135:50400/match?q=GTACACACCACTCGTCGCTCCT&k=0&no_gap=0&offset=0&limit=50
0.250 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=AGGAGCGACGAGTGGTGTGTAC&k=0&no_gap=0&offset=0&limit=45
0.252 | 0.002 | cgi_end;

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