GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 19:46:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Oryzias latipes strain HSOK chromosome 11.
CP020631.1:11154173-11154194
TTAATATATACTGAACTTTGGACATAAACC11154173GTATAATGCAACAATTTGATGTAGACAGTATTGTGTTGAGAACAAGATGAAA
Oryzias latipes Fosmid clone:GOLWFno719_l08, reverse end.
DH346791.1:282-303
TTAATATGTACTGAACTTTGGACATGAACC282GTATAATGCAACAATTTGATGTAGACAGTATTGTGTTGAGAAGACGATGAAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:250233344-250233365
AATTTCTGCTACTTTTTATTTATTTATAGA250233344GTATAATGCAACAATTTGATGTATAATTTGTGGTATTTTTTTGTTGTATAAG
Oryzias latipes strain Hd-rR chromosome 11 sequence.
CP020675.1:18607694-18607715
TTTCATCGTCTTCTCAACACAATACTGTCT18607694ACATCAAATTGTTGCATTATACGGTTCATGTCCAAAGTTCAGTACATATTAA
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:4856984-4857005
CTTATACAACAAAAAAATACCACAAATTAT4856984ACATCAAATTGTTGCATTATACTCTATAAATAAATAAAAAGTAGCAGAAATT
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737873.1:397734192-397734213
GTCGTTTTGTTGCGGATATGTTATACTAAG397734192ACATCAAATTGTTGCATTATACTCCCTCTGTAAACTAATATAAGAGTGTTTA
Dolichopus griseipennis genome assembly, chromosome: 4.
OY720444.1:7034078-7034099
TTTTTACTTGTGATAATTTGAAAGATAAAC7034078ACATCAAATTGTTGCATTATACCCGTTAAAGTTTATTTCTGGGATTTTCATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTATAATGCAACAATTTGATGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTATAATGCAACAATTTGATGT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.142 | 0.133 | search_plus_done; http://172.18.8.135:50400/match?q=GTATAATGCAACAATTTGATGT&k=0&no_gap=0&offset=0&limit=50
0.171 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=ACATCAAATTGTTGCATTATAC&k=0&no_gap=0&offset=0&limit=47
0.174 | 0.003 | cgi_end;

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