GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 05:28:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Tridacna derasa genome assembly, chromosome: 13.
OY723426.1:7255115-7255134
TTTTTTTTCCCACCTGCTCTTTTCAGGAAA7255115GTCACTCAACAACGAAACCAATGATTCCCGTGATACACATGGGAAATATA
CSATR1JP_T3_007_G05_19DEC2008_025 CSATR1JP Cannabis sativa cDNA, mRNA sequence.
JK498730.1:28-47
CTGTTCAAGAATTTTTTGCATTAAAAT28TGGTTTCGTTGTTGAGTGACATTATGGCTTTAGCCTTAACCAATCTTTCG
TSA: Cannabis sativa PK16884.3_1.CasaPuKu mRNA sequence.
JP449992.1:342-361
TTACTGTTCTAGAATTTTTTGCATTAAAAT342TGGTTTCGTTGTTGAGTGACAGTATGGCTTTAGCCTTAACCAATCTTTCG
TSA: Cannabis sativa PK16884.1_1.CasaPuKu mRNA sequence.
JP469187.1:63-82
TCACTGTTCAAGAATTTTTTGCATTAAAAT63TGGTTTCGTTGTTGAGTGACAGTATGGCTTTAGCCTTAACCAATCTTTCG
Hippopus hippopus genome assembly, chromosome: 13.
OX328108.1:45202186-45202205
TATATTTCCCATGTGTATCACGGGAATCAT45202186TGGTTTCGTTGTTGAGTGACTTTCCTGAAAAGAGCAGGTGGGAAAAAAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTCACTCAACAACGAAACCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCACTCAACAACGAAACCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=GTCACTCAACAACGAAACCA&k=0&no_gap=0&offset=0&limit=50
0.243 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTTTCGTTGTTGAGTGAC&k=0&no_gap=0&offset=0&limit=49
0.247 | 0.003 | cgi_end;

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