GGGenome | Results

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2025-04-13 23:33:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Lotus japonicus genomic DNA, chromosome 5, clone: LjT18P14, TM0186.
AP009954.1:78781-78801

AACAACAACAACAAGGGTCAGGGTCATTAT78781GTCAGTGTTGGTTCATATCAAAAACTGGATCAGGATTACGATTTCCGAGAC

Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:50999924-50999944

TTCAACAACAACAAGGGTCAGGGTCATTAT50999924GTCAGTGTTGGTTCATATCAAAAACTGGATCAGGATTACGATTTCCGAGAC

Xylocampa areola genome assembly, chromosome: 12.
OW285211.1:12905863-12905883

TTTCCCGAAAAGTTACTCGGTTGCCAAACA12905863GTCAGTGTTGGTTCATATCAAGTCGAGATCTAAACCAACCATCCATAAAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=GTCAGTGTTGGTTCATATCAA&k=0&no_gap=0&offset=0&limit=50
0.132 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=TTGATATGAACCAACACTGAC&k=0&no_gap=0&offset=0&limit=47
0.132 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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